Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02440 ATGATGATAATAGAGTGTTGTGTCTCTAGAAGTACAACACGTGCATGTGCCACTCTCCCTCAGACAAAATATCCATGTAACATTACAAGAAGACCTTTATCTTTGTCTATCATCTCCACCACTTTCTCTGCTTTAATCTTCTCACTTACTCCTCCACCTTCATCTTCTTCTCCATTAAATTCTTCAAAATTTCCAATAGCTGACTTTTCTGAGCTCCCCAATTCTGGTGGTGTTAAGGCTTTGGAACTCCTTGTTGGTTCTGGTGAAGTTCCTCAAGATGGGGATCAGGTTGAAATTCATTACTATGGTAGACTAGCAGCAAAACAAGGATGGCGTTTTGATTCAACCTATGATCACAAAGATGAGAATGGCGATCCTAATCCATTCGTCTTTGTTCTTGGCTCTGGAAAGGTAATTGCTGGAATTGATGTGGCAGTGAGATCGATGAAAGTAGGTGGTATTCGTAGAGTCATCATACCTCCATCACTTGGGTATCAAAACACATCACAGGAACCTCTCCCACCTAATTTTTTTGACAGGCAGAGGCTGTTCACTACCATTTTCAATCCAACTCGTCTTGCAAATGGTGAAGGCTCCACTTTAGGGACACTTATATTTGATATTGAACTGGTTGGTCTCAGGCATCAGTGA 651 0.4132 MMIIECCVSRSTTRACATLPQTKYPCNITRRPLSLSIISTTFSALIFSLTPPPSSSSPLNSSKFPIADFSELPNSGGVKALELLVGSGEVPQDGDQVEIHYYGRLAAKQGWRFDSTYDHKDENGDPNPFVFVLGSGKVIAGIDVAVRSMKVGGIRRVIIPPSLGYQNTSQEPLPPNFFDRQRLFTTIFNPTRLANGEGSTLGTLIFDIELVGLRHQ 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02440 216 Gene3D - 65 213 IPR046357 GO:0003755
Trre1g02440 216 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 94 214 IPR001179 GO:0003755
Trre1g02440 216 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 90 211 IPR001179 GO:0003755
Trre1g02440 216 SUPERFAMILY FKBP-like 68 214 - -
Trre1g02440 216 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-1, CHLOROPLASTIC 17 216 IPR044197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02440 Trre-Chr1 19741624 19744516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02440 53 214 Calmodulin-binding Proteins AT5G48570 31.288 4.30e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02440 - - cam:101514460 357.836