Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre1g02427 | ATGGGATCATTCTCGGGCATTTGTGAAATTGTTGAAGCAAGGGAAGACCTAAATACAGGGATATATCAGTCCAGTTCTGGATATAGTGTGTCTGAGAAAAATCAGAAGCTTCCTGCGGTGAAACTGGGATACAAGGATAATCTAGATAATGATATTAATAAGCTGTTTGAGTCAATTACTCTCAAGTCTTCATCAAGGGATTTGAGCTTTCTACCAGATGGAACAAGCCCTAAGATGAAAAATGCATTAAAAAAGCCAATGACAATGGGTGTACCTCGATCTCCACGAGTTGGGATTTCTGAGCCGGTGACTTTGAAGCAGGCATTAAGAGACCTATGTATATCTAAGGCATCGGAAATGGCTGCTATGAAAAGGTTATCAAAGTCAGCAGCTTCTCCAAGAATATCAGAGGCCGGGAAGATACAGACATTGTACAATTCGGTTGTCACTGATGCTAGGAGATCCGGGCCTTCTAATGTTGAGAGTAAAGGGAGTTCAACTGAAATATCTCTGGTGCTAGAAGAAGACAAGTCACTTGTCTTGAATAAAGAATCTCCGTCTCATGAAACTTCCAAAAGCACACCATTGAGCCAAAAGGCTCATTCTTCCAAAATCGCAGTTGCAACTACACAAAATGATACAGGGGCTTCGTTGATGCAAAGTGATTTGGAATGTTCGTCAAGTAAAGTTGGGATTTCAGGGGTTTCAGCCCAACCATCAGAACCTACTCAAATAGAAAATCAAATGTCTGCTTCCTCTTCATCTTGTTGTAACACCGATGGAAGTAAAGTAGAGTTGCCAGAAAAAGATTCTTCACCTAAAAAGTTAGGAAATAAAGCATCTATGTCGAAGAATGTGCGGAAAGGTATGTTACAAACAATATCTTCCTCTTCAGGGAATGGCAATAAAGTGTGCAAACTTTCGCGCAATAGCCCCCGAACAGTAAAGTCGGTCATTAAAACCAAGAGTTTGGGTAAGAAGAAACTAAAGCAGGGTTCTGATTCTGCTTTACATGTTCCTCCACCCAATGAGGGAAACAACAACCCAGTTCCGGCTGCAACTCCACTTGTTTGTGAGAGATGTTGGTGTGAAATAGAAAATACAAATATAGAAAGCAGCAAAGGTATTATATCATCGGGTTCTCCAAGCCCTGCAGATGGAATAAACTTGAAAAGTGTACTCTCTGGGCCAGCATCAACAGGTTGTAATAGAGGCATCGAAGTTACAAAAGTGAAAAAGCATACCAGATTGAAAGAGCAGCTTGAGTTTTCACAGAGTTCAAAGAGTAGCCAAGGTGACTACAGTAGTAGTACAAGTACCAGCGATGAGAGTAATATCAGTGGTTCTAGTTGTGGCAATAGGCCTCACATGTCGAAGGATTTTAGATGGCAAGCCATACGAGATGCTCAAATGCAGCATGGCGTCTTGGGCTTGAGACACTTCAATCTTTTGAAGAAACTTGGTTGTGGAGACATTGGTACTGTATATCTTTCTGAACTAATTGGCCAAAATTGTTTGTTTGCTATTAAAGTAATGGACAATGAATTTTTGGCAAGAAGGAAGAAGATGCCGAGGGCTCAAACTGAAAGGGAAATATTACGAATGCTGGATCATCCTTTTCTTCCAACATTGTATGCACAGTTTACATCAGAAAATCTATCATGTCTGGTCATGGAGTATTGTCCTGGAGGAGATCTTCATGTTCTACGTCAGAAACAGCTTGGCAGATGTTTTTCAGAGCCAGCAGCAAGGTTTTACGTAGCTGAAGTCCTTCTTGCTTTGGAGTACTTGCACATGCTTGGAGTTGTTTACCGTGATTTGAAACCAGAAAACATTCTTGTTCGAGAAGACGGTCACATTATGCTCACAGATTTTGACCTTTCACTCAGGTGTGACGTTAGCCCAACACTTCTGAAATCATCTTCTGATATGGATCCTGCCAAGGTTTCTGGTACATGCACAAAGTCAAGCTGCATTGAGCCATTCTGCATTGAACCATCTTGTCAAGTTGCATGCTTCAGTCCTAGATTCTTACCACCTGCGGCAAAAGCAAGGAAACTAAAAGCTGATCTTGCTGCTCACATCAGATCATTGCCGCAGCTTGTGGCAGAGCCCACAGATGCAAGATCAAATTCCTTTGTTGGTACTCATGAATACCTAGCACCTGAGATAATCAAAGGAGAGGGACATGGTGCTGCAGTTGATTGGTGGACATTTGGTGTTTTTCTTTATGAACTTTTATATGGTAGAACACCCTTCAAAGGTTCTAACAATGAAGAAACATTAGCCAACGTCGTCTTGCAAAATCTCAGATTCCCTGATAGCCCTTTTGTTAGTTTCCAAGCAAGGGATCTTATTAAAGGGTTGTTAGTTAAAGAGCCTGAAAACCGTTTAGGTACAGAGAAAGGTGCTGCAGAGATTAAACAACATCCCTTCTTCGAGGGCCTTAATTGGGCATTAATACGTTGTGCTATCCCACCGGAACTTCCTGACCTTTGTGAATTTGAATTGGGACTTTCAGACATGATTGCTCAGTCACAAAGCAAGGATGGCAAATTTTTAGAGTGTACAACAACTGGAGAACAAGTGGAATTTGAGTTGTTCTAG | 2607 | 0.4139 | MGSFSGICEIVEAREDLNTGIYQSSSGYSVSEKNQKLPAVKLGYKDNLDNDINKLFESITLKSSSRDLSFLPDGTSPKMKNALKKPMTMGVPRSPRVGISEPVTLKQALRDLCISKASEMAAMKRLSKSAASPRISEAGKIQTLYNSVVTDARRSGPSNVESKGSSTEISLVLEEDKSLVLNKESPSHETSKSTPLSQKAHSSKIAVATTQNDTGASLMQSDLECSSSKVGISGVSAQPSEPTQIENQMSASSSSCCNTDGSKVELPEKDSSPKKLGNKASMSKNVRKGMLQTISSSSGNGNKVCKLSRNSPRTVKSVIKTKSLGKKKLKQGSDSALHVPPPNEGNNNPVPAATPLVCERCWCEIENTNIESSKGIISSGSPSPADGINLKSVLSGPASTGCNRGIEVTKVKKHTRLKEQLEFSQSSKSSQGDYSSSTSTSDESNISGSSCGNRPHMSKDFRWQAIRDAQMQHGVLGLRHFNLLKKLGCGDIGTVYLSELIGQNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYAQFTSENLSCLVMEYCPGGDLHVLRQKQLGRCFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCDVSPTLLKSSSDMDPAKVSGTCTKSSCIEPFCIEPSCQVACFSPRFLPPAAKARKLKADLAAHIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQNLRFPDSPFVSFQARDLIKGLLVKEPENRLGTEKGAAEIKQHPFFEGLNWALIRCAIPPELPDLCEFELGLSDMIAQSQSKDGKFLECTTTGEQVEFELF | 868 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre1g02427 | 868 | MobiDBLite | consensus disorder prediction | 323 | 348 | - | - | |
Trre1g02427 | 868 | FunFam | serine/threonine-protein kinase D6PK-like | 708 | 831 | - | - | |
Trre1g02427 | 868 | Gene3D | Phosphorylase Kinase; domain 1 | 479 | 560 | - | - | |
Trre1g02427 | 868 | MobiDBLite | consensus disorder prediction | 230 | 261 | - | - | |
Trre1g02427 | 868 | MobiDBLite | consensus disorder prediction | 419 | 455 | - | - | |
Trre1g02427 | 868 | Gene3D | Transferase(Phosphotransferase) domain 1 | 561 | 629 | - | - | |
Trre1g02427 | 868 | CDD | STKc_phototropin_like | 479 | 832 | - | - | |
Trre1g02427 | 868 | Gene3D | Transferase(Phosphotransferase) domain 1 | 706 | 828 | - | - | |
Trre1g02427 | 868 | MobiDBLite | consensus disorder prediction | 179 | 205 | - | - | |
Trre1g02427 | 868 | MobiDBLite | consensus disorder prediction | 422 | 454 | - | - | |
Trre1g02427 | 868 | Pfam | Protein kinase domain | 482 | 633 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre1g02427 | 868 | Pfam | Protein kinase domain | 710 | 813 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre1g02427 | 868 | FunFam | Serine/threonine-protein kinase D6PK-like | 479 | 564 | - | - | |
Trre1g02427 | 868 | FunFam | serine/threonine-protein kinase D6PK-like | 565 | 632 | - | - | |
Trre1g02427 | 868 | SUPERFAMILY | Protein kinase-like (PK-like) | 457 | 829 | IPR011009 | - | |
Trre1g02427 | 868 | ProSiteProfiles | Protein kinase domain profile. | 481 | 813 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre1g02427 | 868 | SMART | serkin_6 | 481 | 813 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre1g02427 | 868 | PANTHER | FLIPPASE KINASE 1-RELATED | 208 | 834 | - | - | |
Trre1g02427 | 868 | MobiDBLite | consensus disorder prediction | 184 | 205 | - | - | |
Trre1g02427 | 868 | MobiDBLite | consensus disorder prediction | 230 | 285 | - | - | |
Trre1g02427 | 868 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 602 | 614 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre1g02427 | Trre-Chr1 | 19585680 | 19590457 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre1g02427 | 1 | 868 | AGC Kinase Gene Family | AT3G52890 | 53.187 | 0.0 | 855 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | AGC_RSK-2 | Trre1g02427 | Pkinase | 2.5e-35 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre1g02427 | - | K08286 | gmx:100813470 | 1302.73 |