Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02416 ATGATGAACTCACACAAGCAACTTTTCATCCTCTCATGTCTTTCCCTAGTACTTGTACTTCTCTCAGCACAAATCGGGTTGCAAGTTGAGGCCGGTCACCATATCAATCATCATTCAAAAAAATTGTTTGTTTTTGGAGACTCGTATGTTGATACCGGCAACACCAAAAAAAATAAACCTGGCTCATGGAAAGAACCATATGGCATAACATCTCCTGGAAAACCAACCGGAAGATTCTCTGATGGTAGAGTTTTAACGGATTTCATTGCAAAGTATTTGAGATTGAGAACACCGATCACTCACAAATTATGGAATAATACTATAGTGCCTAAGCATTATTATTTGAAGTATGGGATGAACTTTGCCTATGGTGGTACAGGTGTATTTGATACATCTACTTCAGGCCCAAATATGACAGCCCAAATTGATATTTTCAATCAGCTCATCCAAGAAAATGTGTACACTCTCTCAGATATCACCAAATCTATTGCTTATGTCTCAGTTGCTGGAAATGATTACAATCATTACTTGGCCACAAATGGCTCTCTCCCGGGCTTCCCATCATTCATTGCCTCAGTAGTTAAGCAAACAACCACCAATTTGATTCATCTCCAAAGCTTAGGGTTTAAGAGAATTGTTGTTGGTGCATTACAACCCCTTGGTTGTCTTCCTCAAGCCACTGCTCAAAAATCATTCCAAAGTTGCAATAGTACATTTAATGACTTAGTAACTCTCCACAACAATCTATTGAACCAATCTGTGACAAAGTTGAACCTAGAAAGCAATGATCACAAAACATTCACAATTCTAGACCTTTTCGATGGTTTTCGGACAGTGTTGAACAACCCTTCAAGCCATAATATCAAGGAACGTTTGAAGCCATGTTGCTTTGGAGTAAGCAGTGAGTATAATTGTGGAAGTGTTGATGAGAATAATGTTAAGAAATATTTGGTTTGTGACAATCCTGAATCAACTTTCTTTTGGGATATTTTGCACCCAACACAAGCAGGTTGGAATGCTGTGTATAATGAGTTGGAGAAGAAAGGCCTTTACAAAATATTGTACTAG 1068 0.3811 MMNSHKQLFILSCLSLVLVLLSAQIGLQVEAGHHINHHSKKLFVFGDSYVDTGNTKKNKPGSWKEPYGITSPGKPTGRFSDGRVLTDFIAKYLRLRTPITHKLWNNTIVPKHYYLKYGMNFAYGGTGVFDTSTSGPNMTAQIDIFNQLIQENVYTLSDITKSIAYVSVAGNDYNHYLATNGSLPGFPSFIASVVKQTTTNLIHLQSLGFKRIVVGALQPLGCLPQATAQKSFQSCNSTFNDLVTLHNNLLNQSVTKLNLESNDHKTFTILDLFDGFRTVLNNPSSHNIKERLKPCCFGVSSEYNCGSVDENNVKKYLVCDNPESTFFWDILHPTQAGWNAVYNELEKKGLYKILY 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02416 355 PANTHER OSJNBB0059K02.9 PROTEIN 9 348 - -
Trre1g02416 355 SUPERFAMILY SGNH hydrolase 40 346 - -
Trre1g02416 355 Gene3D SGNH hydrolase 32 348 IPR036514 -
Trre1g02416 355 Pfam GDSL-like Lipase/Acylhydrolase 42 343 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02416 Trre-Chr1 19450920 19453239 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02416 7 341 Pollen Coat Proteome AT1G75930 26.554 5.36e-23 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02416 - - gmx:100789208 469.544