Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02415 ATGGACTCACACAAGCAACTTTTCATCCTCTTATGTCTTTCCTTAGCACTTGTACTTCTCTCAGGACAAATGGGCTTCCAAGTTGAGGCCGGTCGCCACCATCTCCATCATCCTTCGAGAGAATTGTTCATTTTCGGAGATTCGTATGTTGATACAGGAAACACCCCAAAAAGTAAACCGGGTTCGTGGAAAGAACCCTACGGCATAACTTTTCCCCGAAAACCCGCCGGAAGATTCTCCGATGGCAGAGTTTTATCTGACTTCATTGCCAAAACCTTGGGATTGAGATCACCTATTCCTTACAAATTCAGGAAGATAGTGCCTAAGCAATATTTAAAGTATGGAATGAACTTTGCATATGGTGGTACAGGTGTATTTGATACATCTACTTCAGGCCCAAATATGACAGCTCAAATTGATTCTTTCAATAAGCTCATTCAAGAAAATGTTTACACTCCCTCAGATCTCTCCAAATCTATTGCTTATGTCTCTGTTTCTGGAAATGACTACAATAATTACTTGGCCACAAACGGCTCTCTCCCGGGTTTCCCATCATTTATTGCCTCAGTAGTTAAACAAACCACTACCGATTTGATTCATCTCCAAAGCATAGGATTTAAGAGAATAGTTGTAGGTGGATTACAACCCCTTGGTTGTCTTCCTCTAATCACTGCTCAAACATCATTCCAAAGTTGCAATAGTACATTTAATGACTTAGTAACTCTCCACAACAATCTATTGAACCAATCTGTGACAAAGTTGAACCTAGAAAGCAATGATCACAAAACATTCACAATTCTAGACCTTTTCGATGGTTTTCGGACAGTGTTGAACAACCCTTCAAGCCATAATATCAAGGAACGTTTGAAGCCATGTTGCTTTGGAGTAAGCAGTGAGTATAATTGTGGAAGTGTTGATGAGAATAATGTTAACAAATATTTGGTTTGTGACAATCCTGAATCAACTTTCTTTTGGGATATTTTGCACCCAACACAAGCAGGTTGGAATGCTGTGTATAATGAGTTGGAGAAGAAAGGCCTTTACAAAATATTGTACTAG 1059 0.3938 MDSHKQLFILLCLSLALVLLSGQMGFQVEAGRHHLHHPSRELFIFGDSYVDTGNTPKSKPGSWKEPYGITFPRKPAGRFSDGRVLSDFIAKTLGLRSPIPYKFRKIVPKQYLKYGMNFAYGGTGVFDTSTSGPNMTAQIDSFNKLIQENVYTPSDLSKSIAYVSVSGNDYNNYLATNGSLPGFPSFIASVVKQTTTDLIHLQSIGFKRIVVGGLQPLGCLPLITAQTSFQSCNSTFNDLVTLHNNLLNQSVTKLNLESNDHKTFTILDLFDGFRTVLNNPSSHNIKERLKPCCFGVSSEYNCGSVDENNVNKYLVCDNPESTFFWDILHPTQAGWNAVYNELEKKGLYKILY 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02415 352 Gene3D SGNH hydrolase 32 345 IPR036514 -
Trre1g02415 352 PANTHER OSJNBB0059K02.9 PROTEIN 5 345 - -
Trre1g02415 352 Pfam GDSL-like Lipase/Acylhydrolase 42 340 IPR001087 GO:0016788
Trre1g02415 352 SUPERFAMILY SGNH hydrolase 40 343 - -
Trre1g02415 352 CDD SGNH_plant_lipase_like 42 342 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02415 Trre-Chr1 19432042 19439761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02415 42 338 Pollen Coat Proteome AT1G75930 27.987 6.14e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02415 - - gmx:100789208 484.182