Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02373 ATGCTAGGGAAAAAGATGGTATCATTGAAGAAACTTGCTAAGAAAGTGAAAGCTAGTGGTGGAGCTGACCCTAACATTAACCATGAATGTTTGCTTAAGGGGTATGAAGAAGAATTCTCCACAAACACAACTCCAACTGGTTATTTTGCACTTTATGTGGGAGAAGAGCATCAGAGAAATGTGGTTCCAACAAGTTATCTTTCTCACCCTTTATTCAAGATGTTGCTAGAGAAATCATACAATGAATTTGGGTTTGAGCAGAGGAATGGTCTTGTAGTTCCATGTAGTGTTTCAACATTTCAAGAGGTTGTAAATGCTATTGAATGTAATAATGGCAAGTTTCACTTGGGCAAGATTTTTCATGATGTTGTTTCAAGTGTAGAAAAATAG 390 0.3667 MLGKKMVSLKKLAKKVKASGGADPNINHECLLKGYEEEFSTNTTPTGYFALYVGEEHQRNVVPTSYLSHPLFKMLLEKSYNEFGFEQRNGLVVPCSVSTFQEVVNAIECNNGKFHLGKIFHDVVSSVEK 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02373 129 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 22 103 IPR003676 GO:0009733
Trre1g02373 129 Pfam Auxin responsive protein 25 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02373 Trre-Chr1 19145851 19146240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02373 45 115 Calmodulin-binding Proteins AT5G20810 50.704 3.92e-20 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02373 K14488 - gmx:100776885 181.8