Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02321 ATGTCCACCTCCAAAAAAAAACTAACCTTAAACACTGTCTCCATAAACCTTGGTTGTGGAACATGTAGAAGACCAAAACTTAGTCTCATTTTTAACCCAATACCTAAACACAAAAAACTTCATCTTCATAAAAATTCTTCATCTTCTTCAACCCTTTGGAGAGAGAAAAACAGAGACACTATTGAAACTTCAACTAACACAAGTAACACTACATGTACACTAACAACAAACACCTCTTTCGACTCCGAGAAATCATCGTCGAAAGGATTTGGAAGAGCTGGAAATGAAGGTGTTGCTGTGGAGAAAGATTCTGATGATCCTTATCTTGATTTCAGACATTCAATGTTACAAATGATATTGGAAAATGAGATATATTCCAAGAATGATCTTAGAGAGCTTTTGAACTGTTTTCTTCAGCTGAATTCGAAGGAACATCATGGTATTATTATCAGAGCTTTTACTGAGATCTGGAATGGTGTTTTTTCAGTTAAGTCTGGTTTTTCACCTGGGTTTAATCTCAATCATATGTCACGTGACTTCTAG 543 0.3536 MSTSKKKLTLNTVSINLGCGTCRRPKLSLIFNPIPKHKKLHLHKNSSSSSTLWREKNRDTIETSTNTSNTTCTLTTNTSFDSEKSSSKGFGRAGNEGVAVEKDSDDPYLDFRHSMLQMILENEIYSKNDLRELLNCFLQLNSKEHHGIIIRAFTEIWNGVFSVKSGFSPGFNLNHMSRDF 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02321 180 Pfam Transcriptional repressor, ovate 104 160 IPR006458 -
Trre1g02321 180 NCBIfam uncharacterized plant-specific domain TIGR01568 98 158 IPR006458 -
Trre1g02321 180 MobiDBLite consensus disorder prediction 41 97 - -
Trre1g02321 180 ProSiteProfiles OVATE domain profile. 100 159 IPR006458 -
Trre1g02321 180 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 46 162 IPR038933 GO:0045892
Trre1g02321 180 MobiDBLite consensus disorder prediction 62 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02321 Trre-Chr1 18661093 18661635 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trre1g02321 Ovate 2.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02321 - - tpra:123903281 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g02321 1 18661093 18661635 Trre1g02321 1 18661093 18661635 ECH