Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02251 ATGCATATTAAGTTAGGTCAAACATCAACCATAATAATTTCTTCACCAGATATAGCACAAGAAGTGCTTCAAACACATGATCGATTATTCATAAATCGACCGATTCCTGAAGCTGTACAAGTTCTTGGTCATGATCACTTTAGTTTACCCTTTATGCCAGGTTCAGATCTTTGGAGAGAACTAAGAAAACTATGCAAAAATCATTTGTTTTCTAAGAAAACTCTTGATGCTAGTAATGAACTTAGGTGTAAGAAGTTACAACAACTTTTATGTGATATAGATAAAAGTAGCTTAATTGGTGAAGTTGTGGATGTTGAAAAAGCTGCTTTTAAGACTTCATTGAATTTTATGTCAAATACTTTTTTTTCTATGGATTTTGTTAACTCTGCAGGTGAAATTGATGAATATAAAGATATAGTTGAAAATCTTATAATAGCAATAGGAACACCAAATTTGGTTGATTTTTTCCCACTTTTGAGGATGGTTGATCCACAAGGTATAAGAAGAATTTCAACTACTTATGCTGAAAAGTTGTTGCAAATTATTGATTCCTATATTAGCAAAAGATTGGAGTTAAGAGGGAGTGAAAATTATGTCACAAATGATGATGTGTTAGACACTTTGCTCAACATTTCTCAAGAAGATGGCCAAAAGATGGACAAAACACAGATCAGACATTTGTTTCTTGATTTATTTGTTGCGGGAACTGATACAACTTCCTACGCAATAGAACGAGCAATGGCAGAATTAGTCCACAATCCACATGCAATGTTAAAAGCCAAAGAAGAACTTGAGCAAATAATTGCTCCTTCAATCTCTACTTGTCATTTACTCCATATTATGATGAGCGTGCGAAGAATTCTAGAAATCATTGGCACCTATGCCTGA 888 0.3345 MHIKLGQTSTIIISSPDIAQEVLQTHDRLFINRPIPEAVQVLGHDHFSLPFMPGSDLWRELRKLCKNHLFSKKTLDASNELRCKKLQQLLCDIDKSSLIGEVVDVEKAAFKTSLNFMSNTFFSMDFVNSAGEIDEYKDIVENLIIAIGTPNLVDFFPLLRMVDPQGIRRISTTYAEKLLQIIDSYISKRLELRGSENYVTNDDVLDTLLNISQEDGQKMDKTQIRHLFLDLFVAGTDTTSYAIERAMAELVHNPHAMLKAKEELEQIIAPSISTCHLLHIMMSVRRILEIIGTYA 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02251 295 PRINTS E-class P450 group I signature 243 269 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02251 295 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02251 295 PRINTS E-class P450 group I signature 223 240 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02251 295 Pfam Cytochrome P450 2 271 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02251 295 SUPERFAMILY Cytochrome P450 2 269 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02251 295 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 270 - -
Trre1g02251 295 Gene3D Cytochrome P450 1 284 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02251 Trre-Chr1 17957883 17964042 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02251 1 269 Cytochrome P450 AT3G61040 38.376 2.56e-63 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02251 - - gmx:100792017 332.028