Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02250 ATGCATATTAAGTTAGGTCAAACATCAACCATAATAATTTCTTCACCAGATATAGCACAAGAAGTGCTTCAAACACATGATCGATTATTCATAAATCGACCGATTCCTGAAGCTGTACAAGTTCTTGGTCATGATCACTTTAGTTTACCCTTTATGCCAGGTTCAGATCTTTGGAGAGAACTAAGAAAACTATGCAAAAATCATTTGTTTTCTAAGAAAACTCTTGATGCTAGTAATGAACTTAGGTGTAAGAAGTTACAACAACTTTTATGTGATATAGATAAAAGTAGCTTAATTGGTGAAGTTGTGGATGTTGAAAAAGCTGCTTTTAAGACTTCATTGAATTTTATGTCAAATACTTTTTTTTCTATGGATTTTGTTAACTCTGCAGGTGAAATTGATGAATATAAAGATATAGTTGAAAATCTTATAATAGCAATAGGAACACCAAATTTGGTTGATTTTTTCCCACTTTTGAGGATGGTTGATCCACAAGGTATAAGAAGAATTTCAACTACTTATGCTGAAAAGTTGTTGCAAATTATTGATTCCTATATTAGCAAAAGATTGGAGTTAAGAGGGAGTGAAAATTATGTCACAAATGATGATGTGTTAGACACTTTGCTCAACATTTCTCAAGAAGATGGCCAAAAGATGGACAAAACACAGATCAGACATTTGTTTCTTGATTTATTTGTTGCGGGAACTGATACAACTTCCTACGCAATAGAACGAGCAATGGCAGAATTAGTCCACAATCCACATGCAATGTTAAAAGCCAAAGAAGAACTTGAGCAAATAATTGATCTTCCTTTTTCTGATTCCCGGTTCTGTTCTTCTTCTCTCAACATCATCACATCACTACTCAACAGAGATGAGCGTGCGAAGAATTCTAGAAATCATTGGCACCTATGCCTGATATGA 924 0.3387 MHIKLGQTSTIIISSPDIAQEVLQTHDRLFINRPIPEAVQVLGHDHFSLPFMPGSDLWRELRKLCKNHLFSKKTLDASNELRCKKLQQLLCDIDKSSLIGEVVDVEKAAFKTSLNFMSNTFFSMDFVNSAGEIDEYKDIVENLIIAIGTPNLVDFFPLLRMVDPQGIRRISTTYAEKLLQIIDSYISKRLELRGSENYVTNDDVLDTLLNISQEDGQKMDKTQIRHLFLDLFVAGTDTTSYAIERAMAELVHNPHAMLKAKEELEQIIDLPFSDSRFCSSSLNIITSLLNRDERAKNSRNHWHLCLI 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02250 307 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 268 - -
Trre1g02250 307 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02250 307 PRINTS E-class P450 group I signature 243 269 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02250 307 PRINTS E-class P450 group I signature 223 240 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02250 307 Pfam Cytochrome P450 2 268 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02250 307 Gene3D Cytochrome P450 1 283 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02250 307 SUPERFAMILY Cytochrome P450 2 269 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02250 Trre-Chr1 17957878 17964042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02250 1 270 Cytochrome P450 AT3G61040 38.603 4.20e-63 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02250 - - gmx:100792017 332.413