Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02177 ATGAGGATCAGAAAGAGGCAAATACCTTTCTCTCATTTACCGGTGACTTTCTCAGATCCCAACATGATCAACCGGTCACCGGTGGTGGTGCAACTCAATGATGATACAACCACTTCATCAAATCTTTCTTGCACTCATGACATGGCTACTGCACTATTATCCCTCTCAAATCATCCTCAGCCGTCTGATCAATCACTCCCACCGATCGGGAAACCAACCAACGGCTGTGATGATCCCATACGGCAGCACAAGAAGCAAGATTTTTTGGCCGAAGATGGGAGAGGGAAAGTTAAGGAAGGGGGGCATAAGGGTAATGATACCAGGAAAGGAGGCAACTTGGGTGCACAAATTTCAACCGAGGTTTTCTCACCTTCAATCCCTTCTAGTAATAAACAAGATTGGAAATGGAACGAGGGAGAGAAAACTTTCCCTCTAAAGAAACGGAGAGGGAGCTCAGCGAATAGCAATGATGATGACAATAATAATAATAAGATGGCGAAGGCGAAAAAGAAGATTTATGATAATTATGAATTAGATCAAGAAGACGAAGATATTAAAGAAGTAGTTGTTAGAGAAACAAAACAAAAGAAGGAAAGAGGTGGTGCACTTATGGAAGGTTCGCGGTGCAGCCGCGTTAATGGAAGAGGATGGAGGTGTTGTCAACCAACACTAGTTGGTTATTCTCTTTGTGAACATCATTTAGGAAAAGGAAGATTGAGAAGCATGACAAGTGTAAGAAATAAGTCTCTTGCAGCCGCAACAAGTTCTAAGAACCATATGCTAATTTCTCTAAATGAGTCTCCACCTATCGAAAAGAAAACCGAGTTTGATAGCAAAGACAATGATGCGAAGAAGCCATCGACGATCGGGAAGAAGAGGATGAAGCTTGGAATGGTGAAAGCGCGGTCGATGAGTAGTTTATTGGGACAAACAAACAATGATCTTGCCGTAGCTGAGAATAACAAGTAA 969 0.4231 MRIRKRQIPFSHLPVTFSDPNMINRSPVVVQLNDDTTTSSNLSCTHDMATALLSLSNHPQPSDQSLPPIGKPTNGCDDPIRQHKKQDFLAEDGRGKVKEGGHKGNDTRKGGNLGAQISTEVFSPSIPSSNKQDWKWNEGEKTFPLKKRRGSSANSNDDDNNNNKMAKAKKKIYDNYELDQEDEDIKEVVVRETKQKKERGGALMEGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRLRSMTSVRNKSLAAATSSKNHMLISLNESPPIEKKTEFDSKDNDAKKPSTIGKKRMKLGMVKARSMSSLLGQTNNDLAVAENNK 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02177 322 ProSiteProfiles WRC domain profile. 203 247 IPR014977 -
Trre1g02177 322 MobiDBLite consensus disorder prediction 134 154 - -
Trre1g02177 322 MobiDBLite consensus disorder prediction 55 69 - -
Trre1g02177 322 MobiDBLite consensus disorder prediction 55 165 - -
Trre1g02177 322 MobiDBLite consensus disorder prediction 270 289 - -
Trre1g02177 322 MobiDBLite consensus disorder prediction 77 106 - -
Trre1g02177 322 PANTHER EXPRESSED PROTEIN-RELATED 95 308 - -
Trre1g02177 322 MobiDBLite consensus disorder prediction 111 133 - -
Trre1g02177 322 Pfam WRC 205 245 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02177 Trre-Chr1 17347424 17349399 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02177 - - tpra:123902359 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g02177 1 17347424 17349399 Trre1g02177 1 17347424 17349399 ECH
Trre13g03665 13 44212797 44214648 Trre1g02177 1 17347424 17349399 PCT