Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02173 ATGAGCTTCATGTCTTTGCTACTCAAATATCATATATTTTCACTCATATTCACTATCATATCCTTTACCAAAGTTAGTTGCTTGAATTTTAATTTCTCAACCTTTCAACAAAATGATGCAAACAGATTGATACTACTCAATAACTCATATATACAACAAAGTGCTATCCAAGTAACCCCAGATAATAGTAAAACTTCAATATCTAATTTATCTGGACGTGCTTTATACAAAGATCCATTCAAAATTGCTTCTTTCAACACCACTTTTGTTCTCAATATAACTCCTGAAACTTCCCTTGGTGGAGAAGGCATAGCTTTTATCTTAACTTCAGATCCAACTCTCCCTCAAAACAGTGATGGACACTGGCTTGGTATTGTAAATGCTTCCACTAATGGAACTTCTCGAGCCGCGGTTCTTGCAGTTGAGTTTGATACACGAAAGAGTTCAACCGAAGACGGTCCAAACAACCATGTTGGAATCAATATAAACAGCATATCTTCATTGAAACAAGCATCATTATCAAACACTAAGGTGAATCTTTCATCTGGTTTAGATGTATTTATAAGAATTGAATATTCTAATGATGTAATATCTGTTTTTGGTTCAATGAATGAAACTTCAAATGATTCTATGGAGCCCCTTTTGGTATCTCCATCTCTTAATCTCTCTTCCTATCTTGAACAAGAGGTTTACGTCGGTTTCTCTGCTTCAACAAGCAATTACACAGAGCTAAATTGTGTAAAAGCATGGGAATTCATTGGTGTAGATATTAGTGATAAAATAAATTACTTGTGGATTTTGATTATAATACCAATAGTAATATTGATGATAATCATAGGTGGATTAGTCTTTTTTTTCCTTTATTTTCAAAGAAAAAAAAACATGGAGATTGAAGAAGATACATATGGAGGGATAGAGGATCAAATTCAACACTCATCTATGGCTCCAAAGAAATATCAACTAAAGGAATTGATGAAAGCAACAGGTGGATTCAGCCTTCAAAACAAACTTGGTGAAGGTGGATTTGGAACGGTTTATAAGGGCATTCTTGGAAACAATAAAGAGATAGCTGTGAAGAGAGTCTCGAAGAACTCGCGCCAAGGTAAACAAGAATTTATAGCAGAAGTTACAACAATTGGAAGCCTTCACCATAAAAACTTGGTGAAACTCATCGGTTGGTGCTACGAAAGCAAAGACAAAGAGCTTCTCCTTGTTTACGAGTTTATGCCAAAAGGAAGTTTGGATAAATACTTGTATAACCAATCAAGTGAGTTAGAAGTACAGTATTCAAAAGTACTTGATTGGAAAATAAGAAATAGCGTGATTCGTGATGTCGCACAAGCATTGGATTATCTTCACAATGGATGCGAAAAAAGAGTACTTCATAGAGACATTAAAGCAAGCAACATAATGTTGGACTTGGACTACATTGCAAAATTGGGTGATTTTGGATTGGCGCGTACAATTCAAAAGAGAAACGAAACTCATCATTCCACAAAGGAAATTGCTGGGACACCAGGTTATATGGCACCCGAAACTTTCTTAACCGGAAGAGCAACGGTTGAAACAGATGTTTACGGATTTGGTGTACTTGTTTTGGAAGTTGTGTGTAGAAAAACACCAGGAAATGTGTATGCACAAGATGATTATAAAAATAGTATTGTGTATTGGGTTTGGGAGCTTTATGGAAAAGGCGAAATTGTTAGTGCTGCGGATAAAAGGATAAGTTATGAAGAGGAAGAAGTTGAAACTGTGCTTGTTCTTGGGTTGGCTTGTTGTCATCCAAATCCAAATGAAAGGCCATCAATGAAAACTGTTTTGATGGTTCTAAATGGAGAAATTTCTCCTCCAAATGTTCCAATGGAAAGACCTGCTTTTGTTTGGCCTGCTATGCCTTCATCTTTCAAACATGGTGAAGATAGTTCTCTTGTCAATGGAACTCTCACTCCATTCTCTCAACTTAGTGGCAGATAG 1974 0.3597 MSFMSLLLKYHIFSLIFTIISFTKVSCLNFNFSTFQQNDANRLILLNNSYIQQSAIQVTPDNSKTSISNLSGRALYKDPFKIASFNTTFVLNITPETSLGGEGIAFILTSDPTLPQNSDGHWLGIVNASTNGTSRAAVLAVEFDTRKSSTEDGPNNHVGININSISSLKQASLSNTKVNLSSGLDVFIRIEYSNDVISVFGSMNETSNDSMEPLLVSPSLNLSSYLEQEVYVGFSASTSNYTELNCVKAWEFIGVDISDKINYLWILIIIPIVILMIIIGGLVFFFLYFQRKKNMEIEEDTYGGIEDQIQHSSMAPKKYQLKELMKATGGFSLQNKLGEGGFGTVYKGILGNNKEIAVKRVSKNSRQGKQEFIAEVTTIGSLHHKNLVKLIGWCYESKDKELLLVYEFMPKGSLDKYLYNQSSELEVQYSKVLDWKIRNSVIRDVAQALDYLHNGCEKRVLHRDIKASNIMLDLDYIAKLGDFGLARTIQKRNETHHSTKEIAGTPGYMAPETFLTGRATVETDVYGFGVLVLEVVCRKTPGNVYAQDDYKNSIVYWVWELYGKGEIVSAADKRISYEEEEVETVLVLGLACCHPNPNERPSMKTVLMVLNGEISPPNVPMERPAFVWPAMPSSFKHGEDSSLVNGTLTPFSQLSGR 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02173 657 PANTHER - 48 614 - -
Trre1g02173 657 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 252 IPR013320 -
Trre1g02173 657 Pfam Protein kinase domain 332 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g02173 657 Gene3D Transferase(Phosphotransferase) domain 1 409 616 - -
Trre1g02173 657 Gene3D - 26 260 - -
Trre1g02173 657 ProSiteProfiles Protein kinase domain profile. 331 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g02173 657 Gene3D Phosphorylase Kinase; domain 1 305 408 - -
Trre1g02173 657 FunFam probable L-type lectin-domain containing receptor kinase S.5 409 616 - -
Trre1g02173 657 SMART serkin_6 331 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g02173 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Trre1g02173 657 SUPERFAMILY Protein kinase-like (PK-like) 313 610 IPR011009 -
Trre1g02173 657 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 304 408 - -
Trre1g02173 657 FunFam Probable L-type lectin-domain containing receptor kinase S.5 27 261 - -
Trre1g02173 657 ProSitePatterns Protein kinases ATP-binding region signature. 337 359 IPR017441 GO:0005524
Trre1g02173 657 CDD lectin_legume_LecRK_Arcelin_ConA 28 252 IPR001220 GO:0030246
Trre1g02173 657 CDD STKc_IRAK 337 612 - -
Trre1g02173 657 Pfam Legume lectin domain 28 255 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02173 Trre-Chr1 17311210 17313183 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02173 12 626 Receptor kinase-like Gene Family AT5G55830 36.905 2.28e-120 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre1g02173 Pkinase 1.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02173 - - tpra:123883598 1023.85