Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre1g02137 | ATGAGTTCTTGTTTTGTACCTTTTTCTTCTTCTTCTTCTTCACCACCTAACTCATCAACCACTGAGTTCCTTCATGGCTTAAAGTTTGGTCAAAAAATCTACTTTGAAGATGCAACAAGTGTTGTAACAGCTCAAAGTAGTAAACCATCAGCAATGGTTATGAAAAAAGGAACTCATTATCCACCTAGGTGTCAAGTTGAAGGTTGTAAAGTAGATCTGAGTGGTTCTAAGGCTTATTATTCTAGACATAAAGTTTGTTGCACGCATTCAAAATCTCCAACTGTTGTTGTCTCTGGTTTGGAGCAGAGATTTTGCCAACAGTGTAGCAGGTCAAATGTTCTTTAA | 345 | 0.371 | MSSCFVPFSSSSSSPPNSSTTEFLHGLKFGQKIYFEDATSVVTAQSSKPSAMVMKKGTHYPPRCQVEGCKVDLSGSKAYYSRHKVCCTHSKSPTVVVSGLEQRFCQQCSRSNVL | 114 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre1g02137 | 114 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Trre1g02137 | 114 | Pfam | SBP domain | 64 | 112 | IPR004333 | GO:0003677 | |
Trre1g02137 | 114 | ProSiteProfiles | Zinc finger SBP-type profile. | 61 | 114 | IPR004333 | GO:0003677 | |
Trre1g02137 | 114 | PANTHER | SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 | 17 | 110 | IPR044817 | GO:0003677 | |
Trre1g02137 | 114 | SUPERFAMILY | SBT domain | 61 | 112 | IPR036893 | GO:0003677|GO:0005634 | |
Trre1g02137 | 114 | Gene3D | - | 60 | 114 | IPR036893 | GO:0003677|GO:0005634 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre1g02137 | Trre-Chr1 | 17006933 | 17007277 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre1g02137 | 27 | 114 | SBP-box Gene Family | AT3G57920 | 61.364 | 8.94e-29 | 105 |