Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02131 ATGGCTGAATCAACAGCGAACAACGAAGAAGATGACGATTACATGGCTGACCTTTCTCGCTTTCTTCCTTCCGATTCTAATATTCAACCTCCAATTCCAAAATCTTCTTCAAAAAGGATTTCTGAAAAGAAAGATCCTTCAATAAACTCTTCCAAGAGCCATTTGAAAGCTCTTAACTGGCAAGAACGACGAAAAATTGAAAGAGAAAGAAAGCAAATAAAAGAGGATGAGCAAACATTAGCAAAAGTTGAAGCTCCAATACCACAATCCAACATTGGGTTTAAGCTTCTCAAACAAATGGGTTATACACCAGGTTCTGCTCTTGGTAAGGAGGGTTCAGGCAGGGCTGAACCGGTGGGGATTGAAATTCGACGGTCACGAGCAGGTATAGGTTTAGATGATCCCCACAAGGAGAAGATGAAAAGGGAGGAAATCACGATCAAACAGAAAAGGAAGAATGAGCAGGCTCTGATGGAAGAATTTGGGTCTAGGCAGAAATCACGGTGGCAAAGTAAGAGAATTATTGTTAATTTCAACAAGGCTAAGGCTGCCCTTGACCAATTGGAGAATCGGGATATTGTGGTGCCCCCGAAGAACGAGGATGACGCAGAGGGTGAAGATGAAGAAGAGGAAGAAGTAACAGAAGAGGGATTGCTCGAAGTTTTGATGAAACTAAGGGATGAGTTCAATTACTGCCTCTTCTGCGGATGCAAATATGAATCGAGTTCTGCCCTGTTGGATAACTGCCCTGGAATCAATGAAGATGACCACTAA 774 0.4251 MAESTANNEEDDDYMADLSRFLPSDSNIQPPIPKSSSKRISEKKDPSINSSKSHLKALNWQERRKIERERKQIKEDEQTLAKVEAPIPQSNIGFKLLKQMGYTPGSALGKEGSGRAEPVGIEIRRSRAGIGLDDPHKEKMKREEITIKQKRKNEQALMEEFGSRQKSRWQSKRIIVNFNKAKAALDQLENRDIVVPPKNEDDAEGEDEEEEEVTEEGLLEVLMKLRDEFNYCLFCGCKYESSSALLDNCPGINEDDH 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02131 257 MobiDBLite consensus disorder prediction 193 215 - -
Trre1g02131 257 SMART DUF4187_2 203 257 IPR025239 -
Trre1g02131 257 MobiDBLite consensus disorder prediction 1 64 - -
Trre1g02131 257 PANTHER UNCHARACTERIZED 8 257 IPR039249 -
Trre1g02131 257 Pfam G-patch domain 89 132 IPR000467 GO:0003676
Trre1g02131 257 SMART G-patch_5 87 133 IPR000467 GO:0003676
Trre1g02131 257 MobiDBLite consensus disorder prediction 201 215 - -
Trre1g02131 257 Coils Coil 140 160 - -
Trre1g02131 257 Coils Coil 171 191 - -
Trre1g02131 257 ProSiteProfiles G-patch domain profile. 89 135 IPR000467 GO:0003676
Trre1g02131 257 MobiDBLite consensus disorder prediction 22 36 - -
Trre1g02131 257 Pfam Domain of unknown function (DUF4187) 206 257 IPR025239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02131 Trre-Chr1 16989120 16990766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02131 81 131 C2H2 Transcription Factor Family AT5G26610 43.137 1.53e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02131 - - tpra:123896801 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g02131 1 16989120 16990766 Trre1g02131 1 16989120 16990766 ECH