Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02112 ATGGCTCAAATGCAATACTATATCCAACTTTTCTTCCTCTGCATACTCTCAACCATTGCAATTCTAGCCATACTAACTAGAAAGAAAAACAAGAACCATCTTACTCCACCAAGCCCTCCATCACTACCTATCATTGGACACCTTCACCTTATTTCTGAATTACCTCACCAAAGTTTTCACAAACTCTCAACACAATATGGTCCTATAATGCAACTTTACTTAGGCTCTAAGCTATCTGTAGTACTTTCATGTCCAGAAATCATAAAGGAGTTTCTTAAAACAAAAGAAACTTACTTCTCGAACCGATTTCGAGGAGCTGCAGTCAACTACTTATCATATGGATCAAAGGGTTTTTTGTTTGCACCTTATGGTAACTATTGGAAATTCATGAAGAAGAAATGCATGTCGGAGCTTCTTGGTGGAAAAACAATTGATCAATTCTGTCCCTTAAGGCAACAAGAAACTTTAAGGTTTCTAAGAGTTTTGCAGAAGAAAGGGGAAGCAGGCGAGGCCATCGATGTTGGTGGAGAACTCTTGACTCTGACAAATAGAATCATAACAAGAATGACAATGAGTAAAACTTTTTATGAAAATGATAGTGATGAGGAAGATATTAGGAAGATGGTGCAAGATAGTGTAGAGTTAGCAGGGAAATTTAATTTGTCAGATTTTATTTGGTTTTTTAAGAATTGGGATTTGCAGGGAATGAACAAAAGGCTTGAAGGGATTATGGACAGGTTTGACACAATGATGGAGAGAGTGATAAAGGAGCATCAAGAGGAAAGGAAGAAAAGGAAGGAAAATGGTGAAGCTGCTCATGTTATGGATCTACTTGATATTTTGTTGGAAATTCAAGAGGATGAGAGCAGTGAGATAAACATAACTACAGAGAATGTCAAGGCTTTCATTTTGGACGTGTTTTTAGCAGGAACAGACACATCATCTACAACAATCGAATGGGCTCTAGCCGAGACTTGTCCTGGTGTCTCTTTAGCACTTCAAGTTATTCCTACAAATCTTGCTGCATTGATTCAGTGTTTTCAATGGAAGGTTAATGGTAATGGAATTGTTAACATGAAAGAGAAAGCAGCCTCTACCCTTCAAAGGGCATATCCTTTGATGTGTGTCCCTATTCCTCGTTTTAATTGCTTTTCTTTATTTGAGTAG 1167 0.3762 MAQMQYYIQLFFLCILSTIAILAILTRKKNKNHLTPPSPPSLPIIGHLHLISELPHQSFHKLSTQYGPIMQLYLGSKLSVVLSCPEIIKEFLKTKETYFSNRFRGAAVNYLSYGSKGFLFAPYGNYWKFMKKKCMSELLGGKTIDQFCPLRQQETLRFLRVLQKKGEAGEAIDVGGELLTLTNRIITRMTMSKTFYENDSDEEDIRKMVQDSVELAGKFNLSDFIWFFKNWDLQGMNKRLEGIMDRFDTMMERVIKEHQEERKKRKENGEAAHVMDLLDILLEIQEDESSEINITTENVKAFILDVFLAGTDTSSTTIEWALAETCPGVSLALQVIPTNLAALIQCFQWKVNGNGIVNMKEKAASTLQRAYPLMCVPIPRFNCFSLFE 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02112 388 Pfam Cytochrome P450 36 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02112 388 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02112 388 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02112 388 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02112 388 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02112 388 Gene3D Cytochrome P450 20 325 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02112 388 PANTHER CYTOCHROME P450 93A3-LIKE 13 324 - -
Trre1g02112 388 SUPERFAMILY Cytochrome P450 35 380 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02112 Trre-Chr1 16822028 16824093 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02112 325 388 Cytochrome P450 AT5G06900 45.455 6.14e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02112 K24188 - gmx:100805931 417.927