Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02111 ATGGAGATTATTTTTCAAGAATACATACCAATCTTCTTAATTTTTCTGTCCTCCACAATATTGCTCAAAGCCATATTCACCAAAGCAAGATCAAAGTTTCACCTTCCACCTAGTCCATTAGCCTTACCAATAATTGGACACTTTCACTTACTACTAAAACAACCTCTTCACAGAGCCATTCACAGTCTCTCAAATCATTATGGACCCATAATTCACATATATCTTGGATCCACTCCAATAGTATTTGTTTCCTCATCAGAAATAGCAAAAGAAATCTTCAAAAACAATGAATCTTCTTTCTCGAACCGACCTGCGAATATAGCTATTAACTATCTAACTTACAATTCATCTGATTTAGCTTTTGCTCCTTATGGAACCTATTGGAAGTTCATGAAGAAACTTTGCATGTCAGAGTTTCTCAATGGAAAGATGCTTGATCAACTCCTTCCCATAAGAAAAGATGAGATAAACAGATTTTTGCAGATGATAGTGAAAAAAAGTGAAGCAAATGAGGCTGTGAATGTTACTGATGAGCTTTTGAAACTAACAAATAGTATAGTGATGAGAATGTCAATAGGAAAAAGCTGTTTCAAAGAAGATGATGAAGCTCATATGGTGACTGAAAGGGTGAAAGAATCTGCTATGGTGAGTGGAATGTTTAATTTGGCTGATTATTTTTGGTTTTGTAAGAGATTGGATATTCAAGGAATAAAGAAAAGGTTAAAGGATGTTCATGATAGGTTTGATAACATGATGGAGAATATTATCAAGGAGCATGAAGAGGGTAGAAGTAAATTAGAAAGAAAGGATGGTGCAAAGGATGTATTAGATGCTCTTTTGAGTATTTATGAAGATCAAAACTCAGAGATCAAAATAACTAGAGATAACATGAAAGCCTTCTTGGTGGATATGTTCACAGGTGGGACAGATACAACAGCTGTTACTCTAGAATGCTTTGAATGGAAGATTGAAGATGGAGGAAAAGTTTGTGTTGACATGAATGAGGGTCCTTCCTTTATTCTTTCAAGAGCTAAGCCACTTATTTGCTTCCCAACATCAAGGTTAATACCATTTCCTTCTATGTGA 1086 0.3499 MEIIFQEYIPIFLIFLSSTILLKAIFTKARSKFHLPPSPLALPIIGHFHLLLKQPLHRAIHSLSNHYGPIIHIYLGSTPIVFVSSSEIAKEIFKNNESSFSNRPANIAINYLTYNSSDLAFAPYGTYWKFMKKLCMSEFLNGKMLDQLLPIRKDEINRFLQMIVKKSEANEAVNVTDELLKLTNSIVMRMSIGKSCFKEDDEAHMVTERVKESAMVSGMFNLADYFWFCKRLDIQGIKKRLKDVHDRFDNMMENIIKEHEEGRSKLERKDGAKDVLDALLSIYEDQNSEIKITRDNMKAFLVDMFTGGTDTTAVTLECFEWKIEDGGKVCVDMNEGPSFILSRAKPLICFPTSRLIPFPSM 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02111 361 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02111 361 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02111 361 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02111 361 Pfam Cytochrome P450 36 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02111 361 SUPERFAMILY Cytochrome P450 36 319 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02111 361 Gene3D Cytochrome P450 20 322 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02111 361 PANTHER CYTOCHROME P450 93A3-LIKE 13 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02111 Trre-Chr1 16818129 16820292 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02111 5 317 Cytochrome P450 AT5G06900 44.620 1.53e-96 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02111 K24188 - gmx:100811919 462.225