Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02109 ATGGATCTACTTGATATTTTGTTGGAAATTCAAGAGGATGAGAGCAGTGAGATAAACATAACTAGAGAGAATGTCAAGGCTTTCATTTTGGACGTGTTTTTAGCAGGAACAGACACATCATCTACAACAATCGAATGGGCTCTAGCCGAGACTTGTCCTGGTGTCTCTTTAGCACTTCAAGTTATTCCTACAAATCTTGCTGCATTGATTCAGTGTTTTCAATGGAAGGTTAATGGTAATGGAATTGTTAACATGAAAGAGAAAGCAACCTCTACCCTTCAAAGGGCATATCCTTTGATGTGTGTCCCTATTCCTCGTTTTAATTGCTTTTCTTTATTTGAGTAG 345 0.3797 MDLLDILLEIQEDESSEINITRENVKAFILDVFLAGTDTSSTTIEWALAETCPGVSLALQVIPTNLAALIQCFQWKVNGNGIVNMKEKATSTLQRAYPLMCVPIPRFNCFSLFE 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02109 114 SUPERFAMILY Cytochrome P450 2 106 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02109 114 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 2 50 - -
Trre1g02109 114 Pfam Cytochrome P450 1 50 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02109 114 Gene3D Cytochrome P450 1 51 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02109 Trre-Chr1 16799130 16800385 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02109 2 50 Cytochrome P450 AT5G06900 57.143 1.04e-15 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02109 K24188 - pvu:PHAVU_001G139200g 111.694