Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02108 ATGGCTCAAATGCAATACTATATCCAACTTTTCTTCCTCTGCATACTCTCAACCATTGCAATTCTAGCCATACTAACTAGAAAGAAAAACAAGAACCATCTTACTCCACCAAGCCCTCCATCACTACCTATCATTGGACACCTTCACCTTATTTCTGAATTACCTCACCAAAGTTTTCACAAACTCTCAACACAATATGGTCCTATAATGCAACTTTACTTAGGCTCTAAGCTATCTGTAGTACTTTCATGTCCAGAAATCATAAAGGAGTTTCTTAAAACAAAAGAAACTTACTTCTCGAACCGATTTCGAGGAGCTGCAGTCAACTACTTATCATATGGATCAAAGGGTTTTTTGTTTGCACCTTATGGTAACTATTGGAAGTTCATGAAGAAGAATTGCATGTCAGAGCTTCTTGGTGGAAAAACAATTGATCAATTCTGTCCCTTAAGGCAACAAGAAACTTTAAGGTTTCTAAGAGTTTTGCAGAAGAAAGGGGAAGCAGGCGAGGCCATCGATGTTGGTGGAGAACTCTTGACTTTGACAAATAGAATCATAACAAGAATGACAATGAGTAAAACTTTTTATGAAAATGATAGTGATGAGGAAGATATTAGGAAGATGGTGCAAGATAGTGTAGAGTTAGCAGGGAAATTTAATGTGTCAGATTTTATTTGGTTTTTTAAGAATTGGGATTTGCAGGGAATGAACAAAAGGCTTGAAGGGATTATGGACAGGTTTGACACAATGTGA 753 0.3692 MAQMQYYIQLFFLCILSTIAILAILTRKKNKNHLTPPSPPSLPIIGHLHLISELPHQSFHKLSTQYGPIMQLYLGSKLSVVLSCPEIIKEFLKTKETYFSNRFRGAAVNYLSYGSKGFLFAPYGNYWKFMKKNCMSELLGGKTIDQFCPLRQQETLRFLRVLQKKGEAGEAIDVGGELLTLTNRIITRMTMSKTFYENDSDEEDIRKMVQDSVELAGKFNVSDFIWFFKNWDLQGMNKRLEGIMDRFDTM 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02108 250 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02108 250 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02108 250 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02108 250 Gene3D Cytochrome P450 27 250 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02108 250 PANTHER CYTOCHROME P450 93A3-LIKE 13 250 - -
Trre1g02108 250 Pfam Cytochrome P450 36 247 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02108 250 SUPERFAMILY Cytochrome P450 36 248 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02108 Trre-Chr1 16798306 16799058 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02108 1 250 Cytochrome P450 AT5G06900 43.651 1.21e-68 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02108 K24188 - gmx:100805931 322.783