Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02107 ATGGAGATTATTTTTCAAGAATACATACCAATCTTCTTAATTTTTCTGTCCTCCACAATATTGCTCAAAGCCATATTCACCAAAGCAAGATCAAAGTTTCACCTTCCACCTAGTCCATTAGCCTTACCAATAATTGGACACTTTCACTTACTACTAAAACAACCTCTTCACAGAGCCATTCACAGTCTCTCAAATCATTATGGACCCATAATTCACATATATCTTGGATCCACTCCAATAGTATTTGTTTCCTCATCAGAAATAGCAAAAGAAATCTTCAAAAACAATGAATCTTCTTTCTCGAACCGACCTGCGAATATAGCTATTAACTATCTAACTTACAATTCATCTGATTTAGCTTTTGCTCCTTATGGAACCTATTGGAAGTTCATGAAGAAACTTTGCATGTCAGAGTTTCTCAATGGAAAGATGCTTGATCAACTCCTTCCCATAAGAAAAGATGAGATAAACAGATTTTTGCAGATGATAGTGAAAAAAAGTGAAGCAAATGAGGCTGTGAATGTTACTGATGAGCTTTTGAAACTAACAAATAGTATAGTGATGAGAATGTCAATAGGAAAAAGCTGTTTCAAAGAAGATGATGAAGCTCATATGGTGACAGAAAGGGTGAAAGAATCTGCTATGGTGAGTGGAATGTTTAATTTGGCTGATTATTTTTGGTTTTGTAAGAGATTGGATATTCAAGGAATAAAGAAAAGGTTAAAGGATGTTCATGATAGGTTTGATAACATGATGGAGAATATTATCAAGGAGCATGAAGAGGGTAGAAGTAAATTAGAAAGAAAGGATGGTGCAAAGGATGTATTAGATGCTCTTTTGAGTATTTATGAAGATCAAAACTCAGAGATCAAAATAACTAGAGATAACATGAAAGCCTTCTTGGTGGATATGTTCACAGGTGGGACAGATACAACAGCTGTTACTCTAGAATGGTCATTAGCAGAACTAATTAACCATCCAACTAAAATGGAAAAAGCAAGGAAAGAAATTGATTCAATGATTAAAAATGATAGAATAGTAATAGAATCAGATATATATTATTTACCTTATCTTCAAGCCATAGTGAAGGAAACACTAAGACTTCACCCTCCATCTCCATTTATATTGAGAGAATCAACAGAAAACTGCACAATTTCTGGATATGATATCCTAGCCAAAACTCAAATTTTTACTAATATTTGGGCTATTGGAAGGGATCCAAAGTATTGGGATAACCCTCTTGAATTTTTGCCAGAAAGGTTTCTTATTAAAGATGAAAATGGAAAAGAAAGTCCTGTTGTGGAAGTTAGGGGACAAAATTATGAGCTTTTGCCTTTTGGAAGTGGTAGAAGAATGTGTCCTGGAACTTCACTAGCACTAAATGTTGCTCACACAACCCTTGCAAATATGATTCATTGCTTTGAATGGAAGATTGAAGATGAAGGAAAAGTTTGTGTTGACATGAATGAGGGTCCTTCCTTTATTCTTTCAAGAGCTAAGCCACTTATTTGCTTCCCAACATCAAGGTTAATACCATTTCCTTCTATGTGA 1551 0.3456 MEIIFQEYIPIFLIFLSSTILLKAIFTKARSKFHLPPSPLALPIIGHFHLLLKQPLHRAIHSLSNHYGPIIHIYLGSTPIVFVSSSEIAKEIFKNNESSFSNRPANIAINYLTYNSSDLAFAPYGTYWKFMKKLCMSEFLNGKMLDQLLPIRKDEINRFLQMIVKKSEANEAVNVTDELLKLTNSIVMRMSIGKSCFKEDDEAHMVTERVKESAMVSGMFNLADYFWFCKRLDIQGIKKRLKDVHDRFDNMMENIIKEHEEGRSKLERKDGAKDVLDALLSIYEDQNSEIKITRDNMKAFLVDMFTGGTDTTAVTLEWSLAELINHPTKMEKARKEIDSMIKNDRIVIESDIYYLPYLQAIVKETLRLHPPSPFILRESTENCTISGYDILAKTQIFTNIWAIGRDPKYWDNPLEFLPERFLIKDENGKESPVVEVRGQNYELLPFGSGRRMCPGTSLALNVAHTTLANMIHCFEWKIEDEGKVCVDMNEGPSFILSRAKPLICFPTSRLIPFPSM 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02107 516 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02107 516 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02107 516 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02107 516 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02107 516 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02107 516 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02107 516 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02107 516 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02107 516 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02107 516 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02107 516 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02107 516 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02107 516 FunFam Cytochrome P450 family protein 27 504 - -
Trre1g02107 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Trre1g02107 516 Pfam Cytochrome P450 36 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02107 516 Gene3D Cytochrome P450 20 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g02107 516 CDD CYP93 68 506 - -
Trre1g02107 516 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 14 501 - -
Trre1g02107 516 SUPERFAMILY Cytochrome P450 36 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02107 Trre-Chr1 16794390 16796547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02107 5 509 Cytochrome P450 AT5G06900 45.472 3.96e-166 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02107 K24188 - tpra:123896058 734.947