Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02047 ATGGAAAATTGCTGTGCAAATCTATGCGGTGTGTTCAAGAAAGAAAAACAAATACCCCAAAAACCCCAAATACCAATAACGAAGATAGTTGTGTTAAGAGAGCCCACGGGCCGAGAGATTGGGCTACGATACGAATTAGGAAGGGAACTATGGAGAGTTGAATCCGGAATAACATACCTTTGCAAAGACAGACAAACGGGAGAAGAACTTGCTTGCAAGTCAATTTCGAAGAATAAGCTTAGAAATGCGATTGATATTGAAGATGTTAGAAGAGAAGTTGAAATCATGAGACATTTACCTGAACACCCTAACATAGTTTCGTTGAAGTATACATATGAAGACGAAGACGAAGTTCATCTTGTTATGGAACTCTGTGAAGGTGGTAACCTTCTAGATCGTACCGTTGCTGGAGGACGTTATACCGAAAGCTCCGCAGCTTATCTCATTAAAACCGTCGTCAGAGTTGTTCAGATGTGCCACAAACATGGTGTGATGCTTCGGAATCTCAAACTCGAAAACTTGTTGTTTGCAGACAAGCGGGATATAGCACCTTTGAAAGTTGCGGATTTTCATTCGTCAATTTTCTTTCAACCAGGTGAAAGATTGAATCAGATAATTGGAAGTCCATATTACATGGCCCCTGAAGTATTAAATAGAAATTATGGTCCCAAAATTGATATCTGGAGTGCTGGAGTCATTCTTTACATCTTACTTTGTGGTCTCCCTCCGATGTGGGCTGATTTGGATCCTCTGCAGCAAATCTGTCTGCTAAAATCTCTGCTGCAAGAGATAAATGAAACTGGGCAGGGAATTACCGAATCAATTATAGAATCTGTTATTGACTTTAAAAGGGAGCCATGGCCAAAGGTTTCTGATAATGCAAAAGACCTTGTTAAAAAGATGCTTGATCTTGACCCAAAGCGCCGGTTTTCTGCAAAGCAAGTGTTGGGGAAAATGTAA 960 0.4042 MENCCANLCGVFKKEKQIPQKPQIPITKIVVLREPTGREIGLRYELGRELWRVESGITYLCKDRQTGEELACKSISKNKLRNAIDIEDVRREVEIMRHLPEHPNIVSLKYTYEDEDEVHLVMELCEGGNLLDRTVAGGRYTESSAAYLIKTVVRVVQMCHKHGVMLRNLKLENLLFADKRDIAPLKVADFHSSIFFQPGERLNQIIGSPYYMAPEVLNRNYGPKIDIWSAGVILYILLCGLPPMWADLDPLQQICLLKSLLQEINETGQGITESIIESVIDFKREPWPKVSDNAKDLVKKMLDLDPKRRFSAKQVLGKM 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02047 319 PANTHER SERINE/THREONINE-PROTEIN KINASE 43 316 - -
Trre1g02047 319 Gene3D Transferase(Phosphotransferase) domain 1 130 319 - -
Trre1g02047 319 Pfam Protein kinase domain 54 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g02047 319 Gene3D Phosphorylase Kinase; domain 1 46 129 - -
Trre1g02047 319 FunFam Calcium-dependent protein kinase 1 46 129 - -
Trre1g02047 319 SUPERFAMILY Protein kinase-like (PK-like) 43 317 IPR011009 -
Trre1g02047 319 CDD STKc_CAMK 43 316 - -
Trre1g02047 319 ProSiteProfiles Protein kinase domain profile. 44 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02047 Trre-Chr1 16289620 16294569 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02047 1 316 EF-hand Containing Proteins AT3G57530 58.333 1.20e-138 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trre1g02047 Pkinase 1.2e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02047 K13412 - gmx:100815320 410.994