Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02004 ATGGAGTCGGTGGTGGGAGTGACGGAGACGAGTAGCGGGAAGATGTTTGGAGGTTACAATAAGAGATACAAACATCACAGTCAAACTCTTGGCTGTTCAATGAACTTTCACGTTTACTTCCCTAACAATTCCGATAACAAACCATTCCCTGTTCTTTATTGGCTCTCCGGTCTCACTTGCTCCGACGAGAATTTCATTTTCAAGTCCGGTGCTCAACGCGCCGCCTCCCAATACGGCGTTGCCTTGATCGCCCCTGACACTTCTCCACGAGGCTTGAATGTTGAAGGAGAAGCTGACTCCTGGGACTTCGGTGTAGGTGCAGGATTTTATCTCAACGCTACACAAGAGAAATGGAAGAATTGGCGCATGTATGACTATGTTGTCAAGGAATTACCAAAGCTTTTAAGTGATAACTTCCCGCAGCTTGACACAACCAGAGCTTCAATATTTGGCCATTCTATGGGTGGGCATGGTGCATTGACCATCTACCTGAAAAATCTGGATAAATATAAGTCAGTTTCTGCCTTTGCACCAGTAGCAAATCCTACAAATTGTCCTTGGGGACAAAAGGCTTTCACAAATTATCTAGGTGACAATAAATCTGATTGGGAGGATTACGACGCTACTTACTTGGTAACAAAGTTTCCCGGTGTATCTGCCACCATTTTGATTGATCAGGGGGAAGATGACAAATTTTTGCATGATCAACTGCTACCTCGCAAGTTTGAAGAGGCGTGCAAGAATGCCAACGTTCCACTGCTGCTACGCTTTCAACCTGGTTATGACCACTCTTATTATTTTATTGCCACATTTATCGATGATCACATCCGACATCATGCTCAAGCTCTTAGGCTTGATTAA 861 0.4437 MESVVGVTETSSGKMFGGYNKRYKHHSQTLGCSMNFHVYFPNNSDNKPFPVLYWLSGLTCSDENFIFKSGAQRAASQYGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFPQLDTTRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPVANPTNCPWGQKAFTNYLGDNKSDWEDYDATYLVTKFPGVSATILIDQGEDDKFLHDQLLPRKFEEACKNANVPLLLRFQPGYDHSYYFIATFIDDHIRHHAQALRLD 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02004 286 NCBIfam S-formylglutathione hydrolase 11 283 IPR014186 GO:0018738|GO:0046294
Trre1g02004 286 PANTHER S-FORMYLGLUTATHIONE HYDROLASE 7 284 IPR014186 GO:0018738|GO:0046294
Trre1g02004 286 FunFam S-formylglutathione hydrolase 7 285 - -
Trre1g02004 286 SUPERFAMILY alpha/beta-Hydrolases 10 283 IPR029058 -
Trre1g02004 286 Gene3D alpha/beta hydrolase 8 286 IPR029058 -
Trre1g02004 286 Pfam Putative esterase 27 277 IPR000801 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02004 Trre-Chr1 15985516 15989822 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02004 6 285 Carbohydrate Esterase AT2G41530 79.359 3.85e-172 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02004 K01070 - gmx:100796669 514.227