Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02000 ATGGAGTCGGTGGTGGGAGTGACGGAGACGAGTAGCGGGAAGATGTTTGGAGGTTACAATAAGAGATACAAACATCACAGTCACACTCTTGGCTGTTCAATGAACTTTCACATTTACTTCCCTAACAATTCCGATAACAAACCATTCCCTGTTCTTTATTGGCTCTCCGGTCTCACTTGCTCCGACGAGAATTTCATTTTCAAGTCCGGTGCTCAACGCGCCGCCTCCCAATACGGCGTTGCCTTGATCGCCCCTGACACTTCTCCACGAGGCTTGAATGTTGAAGGAGAAGCTGACTCCTGGGACTTCGGTGTAGGTGCAGGATTTTATCTCAACGCTACACAAGAGAAATGGAAGAATTGGCGCATGTATGACTATGTTGTCAAGGAATTGCCAGAGCTTCTAAAAGATAACTTTCCACAGCTTGACACATCCAAAGCTTCAATATCTGGCCATTCTATGGGTGGGCATGGTGCACTAACTATCTACCTAAAAAATCTGGATAAGTATAAGTCAGTTTCTGCCTTTGCACCAGTAGCAAATCCTACAAACTGTCCTTGGGGACAGAAGGCATTCACCAATTATCTAGGTGGCAATAAATCTGATTGGGAGGATTACGATGCCACTTATTTGGTGAGAAAACATCCCAATGTATCTACCACCATTTTGATTGATCAGGGGGAAGATGACAAATTTTTGCATGATCAACTGCTGCCACATAAGTTTGAAGAGGCATGCAAGAATGGCAATGTTCCGCTGTTGTTACGTCTTCAACCTGGTTATGATCACTCCTACTATTTTATTGCCACCTTCATTGATGATCACATCAAGCATCATGCTCAAGCTCTTAAGGCTTAA 858 0.4406 MESVVGVTETSSGKMFGGYNKRYKHHSHTLGCSMNFHIYFPNNSDNKPFPVLYWLSGLTCSDENFIFKSGAQRAASQYGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPELLKDNFPQLDTSKASISGHSMGGHGALTIYLKNLDKYKSVSAFAPVANPTNCPWGQKAFTNYLGGNKSDWEDYDATYLVRKHPNVSTTILIDQGEDDKFLHDQLLPHKFEEACKNGNVPLLLRLQPGYDHSYYFIATFIDDHIKHHAQALKA 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02000 285 Gene3D alpha/beta hydrolase 8 284 IPR029058 -
Trre1g02000 285 NCBIfam S-formylglutathione hydrolase 11 283 IPR014186 GO:0018738|GO:0046294
Trre1g02000 285 FunFam S-formylglutathione hydrolase 7 285 - -
Trre1g02000 285 Pfam Putative esterase 27 277 IPR000801 -
Trre1g02000 285 SUPERFAMILY alpha/beta-Hydrolases 10 284 IPR029058 -
Trre1g02000 285 PANTHER S-FORMYLGLUTATHIONE HYDROLASE 7 284 IPR014186 GO:0018738|GO:0046294
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02000 Trre-Chr1 15957414 15961021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02000 6 284 Carbohydrate Esterase AT2G41530 79.286 9.08e-170 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02000 K01070 - csav:115710107 503.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g02000 1 15957414 15961021 Trre1g02000 1 15957414 15961021 ECH