Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01985 ATGTGCATGATTGAGTACTGTATCGGAGGATTCATAGCCATCTCCATCCTCTTTTTCATATACATCCACTACTGCAGACACAGTAGAAATGAAATTGTTCCGAATTGGCCAATAATTGGTATGGTACCGACGTTTGTGCGTCATGTGTCCGATTTCCATGATTTTTCAACCGTGGTTCTTAAGCGTCATGGAGGAACCTTTCGATTTCAAGGGCCGTGGTTCACAAACACAAGCTTTATCGCTACCACCGATCCAATGGACGTCGACCACATCTCCAACAAGAATTTTAGTAACTACAGGAAAGGGACAAACTTCTAA 318 0.4277 MCMIEYCIGGFIAISILFFIYIHYCRHSRNEIVPNWPIIGMVPTFVRHVSDFHDFSTVVLKRHGGTFRFQGPWFTNTSFIATTDPMDVDHISNKNFSNYRKGTNF 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01985 105 SUPERFAMILY Cytochrome P450 31 103 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01985 105 Gene3D Cytochrome P450 26 105 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01985 105 PANTHER CYTOCHROME P450 22 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01985 Trre-Chr1 15848321 15848638 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01985 12 105 Cytochrome P450 AT4G39510 39.362 5.16e-21 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01985 - - lja:Lj0g3v0237839.1 131.339