Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre1g01920 | ATGAACATTTTGTTGTTGAAACCCTTGTGCTTCCTTGTTATCTTCGCTCTGATTATCAACGCCATGTCCGATTCAGCACCCAAATCCATCGATTCCGATTCTTCTTCTTCTACTGCTCCTGCAGTTCACATCATCTACACCGAGAAGCCACAGGAAGAGGAACCTGAGACTTACCACATCCGAACCCTCACTGCGGTTCTTGGCAGTGAGGATGCTGCAAAGGAGGCTTTGTTGTATAGTTATAAGTCTGCAGCTAGTGGCTTCTCTGCTAAGCTTACTCCTGATCAGGTTGCTCAAATTTCAAAACAACCAGGTGTTCTTCAAGTTGTTCCAAGCCAGACACTTCAGCTCCATTCAGGACCAAATAAGCTGCACTAG | 378 | 0.4577 | MNILLLKPLCFLVIFALIINAMSDSAPKSIDSDSSSSTAPAVHIIYTEKPQEEEPETYHIRTLTAVLGSEDAAKEALLYSYKSAASGFSAKLTPDQVAQISKQPGVLQVVPSQTLQLHSGPNKLH | 125 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre1g01920 | 125 | PANTHER | PROTEINASE INHIBITOR, PROPEPTIDE | 10 | 121 | - | - | |
| Trre1g01920 | 125 | Pfam | Peptidase inhibitor I9 | 44 | 118 | IPR010259 | - | |
| Trre1g01920 | 125 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 24 | 118 | IPR037045 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trre1g01920 | Trre-Chr1 | 15334814 | 15337002 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trre1g01920 | 2 | 119 | Subtilisin-like Serine Gene Family | AT1G66220 | 36.885 | 3.04e-15 | 68.9 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre1g01920 | - | - | cam:101512261 | 177.563 |