Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01895 ATGTGGAAAATACTATTATGCTTTGTCCAGCAGTCAATGACTGTTTATATTGAACTAAATAAAATCAAGGAGATAATATCTTTGGATTCTCCAACATATAATATATCTTATTTTCACTTTCATTCTTTCTCAAGTCACAAGGAAGAGGAGTACATTGAGGGAAGCGATGGAGATTCTTATTCATTAGCTGCAAAAGTAGCAGAGTATACCGTCGCACCTATTGGACGACAAGCAAATCATTTGCTTTCCTACAAAGGAAATTTCAAGGAGCTAGCAGATCGTGTCAACGAGCTTGAGGCGGAAAGAGTAACTACAAACCATGCCATTGAACACGAAAGAAGGAACCTGCGAGAAATTAAACCCAATGTGCTAAAATGGTTAGAGGAGGCGAACAAGATTATTGAAAAGGCAAACCAGCTTCAAAGAGATCCTCGTTGTTCTAAGGTTGGGTGCTCTGTAAGATTGTTCCCCAATTTGATTTTACGTCATCAACTCAGTAGGAAAGCCAAAAAGATCACACAGGAAGTTGTTCAAGTACTGAACAAAGGAAAGTTTGATCAAGTTGGTTACCATCCCCCATTAGATAGTGCTGCCTTTTTTAACTCTTTTTCCACAAGAGGCGGTGTAACGTTTGAGACAAGGGAGTTGTTTAAGAAGGAAATTGTGAAGGCTCTAGAAGACTCCAATGCATGTAACATTGGGATCTACGGGCTAGGAGGGGTGGGTAAAACCACTCTAGTGAAGGAAGTTGCTCAAATTGCTAGGCAACACAAGTTGTTTGATGTAGTGGTTATGGCCAATATATCCAAAACTCCAGACATTAAAAGAATTCAAAAGGAGATTGCTGAGCAGCTGGATCTGCCATTTGGCAAGGAAACTATTGCTGGGAGAGCTTCCCGCCTAAGGAAGAGAATCAAAGCAGAGAAAACTATCCTTGTCATTCTAGATGATATGTGGCCATCATTTGAATTGGAGAAAGCTGGAATTCCATTAGCGACTCAAGAGGAATTCACTTTCAGACTTGACCTGTTGAACGAAGAAGAAACATGGCGCTTGTTTCAATTTAAGGCTGGTGAGAAGGTTAATGATACTCTTTTACAAAATGTAGCTACTCAAGTGGCCCGAAAATGTGCAGGTCTACCTCTTATCATAGTGACAGTGGCAACAGGATTGAAAAATAAGGATATTTATGCTTGGAAAGATGTGTTGAGGCAATTAGAAAGTGCTGGTCATGCGGAAATGGAAGAGATAACTTATTCTGCTTTAGAGTTGAGTTACAAGTGGTTGGCGAGTGATGAATTGAAGGCACTCTTTTTGCTTTTTGCATCACTACAAGGCGATGATATAGAGTACATACTAAGTGTTGTTGTGGGTTTGGATATATTCAAGGATATAGATACTGTTGATGATGCAAGAGACAAACTTTACACCATAATCGATTCTTTGAAGGCATCTTGTTTATTGAATGAAGGTAAGATTGGGGAGGTCCAAATGGGTAACATTGTTCGTGATGTAGCTATCAACATAGCACATAGGGGTTACCATGTATTTCAGAGGGAAGGGCCGGATGAGTTGAAGGAATGGCCAACTAAGGACCTAATAAAATGCCCACATATCATCTTAAATGGGTGTCACATTCACGAGCTTCCTCAAAGGTTAGATTGTCCTAACATTAAGTTTTTTTACTTGTACAATGTAAATCCTTCTTTAGAGATCCCAGATATTTTTTTTGAGGGGATGGGAAGCCTTAGAGTGTTAGATTTAACACTCTTGAACTTGTCTTCATTACCCACTTCTTTTCAGTCCCTAACCAACCTTCAAACATTGACCTTGTATCAATGCACTTTGGAAAATATCGATGCAATAGGAGCTCTGAAAAATTTAGAAATTCTTAGGCTCCGGAAATCATCAATGATCAAATTGCCAAAGGAAATAGGAAATTTGACAAAAATAAGATTGCTCGATTTGAGTCATTCAGGTATAGAAGTGATCCCACCCAACATCATATCAAGCTTATCTAAGTTGGAAGAATTGTACATGGGAAATACCTCTATTAAGTGGGAAGATGAGAATTCAGCTAAGCAAAATGTAAATGCGAGCCTTGCTGAGCTTAGACAATTGTCCAAGTTGACTGCTCTAGAATTACAAATTCGTGAGGCTTGGATATTGCCAAGGGACTTAAAATTGATGTTTGAGAAGCTGCAAAGATATAAAATAGCTATTGGAGATGTATGGGAATGGCCTGAGATTGAGGATGGAACCTTGAAAACATTATTGATGCTCAAATTGGGACCCAACAAACATTTAGAGCATGGGATTAAAGCATTGATTAAAGAGGCTGAGAGTTTGTACTTGGATGAAGTAGATGGTGTTCAAAATGTGCATTTTCAACTGAACTCAGAAGGATTTCCATTGTTGAAGCACCTCCACATACAAAATAATACTAAATTGAAGCAGATAGTTGACTCTATGGAGAAGAAGCAAGTTCAAGCTTCCTTTATCAACTTGGAAAAGCTAGTACTTCAGAATCTTAAAAACTTGGAGCAAATATGTCATGGCCAACTTGCAATTAATTCTTTTGGCAAGCTTAGTGTTATCAAAGTCAAAAACTGTGCCCAATTAAAATATCTTCTCTCCTATTCTATGGTTAAGGGGCTTACCCAACTTTCAGAGATTGAAGTCTGTCAATGTAATTCTATGAAGGAGATGGTGCTTCTCAGACCCGATTCAAATGTTGAGAATAGCACGAATGAAAAAATTGAGTTTCTTTCATTGCGTTCTTTGACTTTAAAGCATTTGCAAAAACTTGATAATTTCTTCTCTTATGAGTCGACGTCTATCAGAAATGAGCAAAAGGATCAAGGATTAGAGTCTTATGTTTCTGCATCGTTTTTCAATGCTCAGGTTGCATTTCCTAATTTGGATACTCTTGAGCTGAACTCACTAAATTTGAACATAATTTGGGGTGACAACCAGCATTCTTTTTCCAAATTAACATATTTGGTTGTGGAGAATTGCGGTGGTTTAAAGTACTTATTCTTGTCCTCCATGGTTGGAAGTTTTATAAACCTCAAACGACTTGAAATTAGTAAATGTTCTTTGATGGAGGAGATTATAGATGCAAAAGGGAAAAACAATGGTACTGATGTATCAAACGAGGTTCGATTCTCCAAATTAGAGGAAATCATATTGAAAGACATGGAGAATTTGAAGACAATATGGCACCACCAGTTTGACTCATTGAAGAAGTTGGAAGTGAACAATTGTGAGAAAATAACTGTCGTTTTTCCTTCTTCACTGCAAAAAACTTACAATAATGTAGAGAAGCTAGATATTTCATACTGTGCATCAGTGGAAGAGATATTTGAATTGAGTTCCAATGAGAAGGGAATTAAGGAGGATGCAACACATCTGAAAGAAATCACTTTAAGTGTAATGCCAAAGTTGAAAAATATATGGAGTAGGGATCCTCAAGGAATTCTTAGTTTTCATAATCTAGAAAATGTATCTCTGGATAGTTGTGGAAGCATGAAATATCTATTTCCAAATTCTGTAGCCACTAGTTGCTCGCATCTAGAAATACTTGGTTTGGTATCGTGTGGGAACATGAAGGAAATTATCACTGAGAAGAAAGGATCTGTGTGCACAACTCCCATATTTGAATTCAATAAGTTGAATACTCTAATGCTTTGGGACTTACCTAAGCTCAAGGGTTTCTATGCAGGAACTCATACTTTAACATGTCCATGTTTGAGTTCAATTTTTGTTTCAGGTTGTTCAAAACTGAACTTATTCAAAAGTTCACTTACAAGCAGCATGCGCATAAAGTTTCCAAATGGCAAACTCCCTATTGCGGAAGAAGCTCCACTTTTCATAGTTGAAAAGGTGAATCCAGATTTGGAGGAATTGATTTTTGACTATAGGGATGCTATAATGATTTGGAAAGACAAAAATTTGGGTGATAACTTCACCAAAATTAAACATCTTGGGCTGCTCAATGGTGTAACGGAAGAGGCTATTTTTCCTTACTGGTTTCTCCAAAATTTGCCTACTCTTGAGCAGCTAACAGTTGATTTGAGTTCCTTCAAAAAGATATTCCCAGATCAAAGGTTAGTAGCGGAGGAATGTTCAACACGGCTTAAAGGGTTGAGACTTAATCAACTGCCTGATCTTCAATATATATGTGAAGAAGGATGCCAAATCGATCCAGTTCTTAAACAACTTGAACAAATGGAAATCAATTCATGTCCTAGTTTGACAATTTTATCACCTTCCTCTGTTACTTTTAGTCACATGACATATTTGGCAATAACAAATTGTGATGGGATGAAAAAGTTAATTACATCTCCTACGGCAAGAAGCCTAACCAACCTCACAACAATGATAGTAAACAACTGTAATTCACTTGAAGAAATAATTACAGGAAGTGAAGGTGTTAGCATTACACTTACTAGTTTGGAAATATTGATGCTGGAATGTTTGCCAAGGCTCAGCAAATTTTGCTCTAGTAAGTCCTTATTGAAGCTTCCTTTGTTGGAGGAAGTAGTTGTGAGGGAATGTCCTCGCATGAAGATTTTCTCTGAGGGAAATGTGAGCACACCAATTCTTCGAAAAGTGAAAACTGCAGAAGATGTTGGGAAATGGGATCGGAATGGAAACCTCAATGGTACAATAAAGAATATGTTTGAAGATAAGGTTGCATTTTGTGAATTTAAACATTTAACCTTGGCTGAATACCCTGAGATTAAGGATTTGTGGTATGGCCAACTTCAATCCAATGTGTTTTGCAATTTGACATCTCTAGTCGTGCAACAATGTGATTTTTTGTCAGATGTACTTTTTCCATCAAATATACTGCAAGTGCTTATTGGACTTCAAGAACTTGAAGTAAGAGATTGTGATTCATTAGAAACAATATTTGATGTGAAAGGTATTCAATCTAAAGAAATATTGGTGAAACCAACCACTGAATTGAAAAAATTAACTTTGTCTAGCTTACCAAAACTGAAGCACATATGGAATGAGGATCCTCATGAAAGTATCAGCTTTGGAAAATTAGAAACAGTGGATGTTGTTAAATGCCAAAGCTTGTTAAATATATTTTCGCTATCACTATGCCAAGATCTTGGACATCTTAAAATACTCAGGATATGGTTTTGTGGAGTCAAAGAAATTGTTGCAGTGGAAGAAGGATCAATGAAAAATAACATCCGTTTTCCTCAAATGACTGAATTGGGATTAATTGGATTGACAAAGCTCAAGAATTTTTATCCAGGAAAACACACTTTAGAGTGCCCTTCATTGAAGATATTAAAAGTGTATCAATGTGAAGCATTAAAGATGTTTTCCTTCAATCATTCAGGCTTCAAACAGCCTAATCAGGTGGATGAAATTCATGACATTGATATACCATTTCAAATAGCTCTGTTTTCTATTGAAAAGGTAAGCTCCAACATGGAAGATTTGGCATTATGTGGCAACGATGCATTAAAAATATTGAGTGGTTGTTGTCCGGAAAATCTCTTTCAGAAAGTTGAATTTCTTCGTTTGCAGTCTTTCGAGGAAACTCCAATTACTTTTCTGAATGGTTTCCATGAAATGTTTCCCAATGTGGTAACACTTCAAGTGCGTGGTAGTTCTTTTGAAACATTGTTCCTCACAGCAGGAATTGATCATCTAAATTCACAATATCCCAAGCAAATAAGAAATTTGTGGCTTTTAGATTTAGAACAACTCAGAATTATTTGGCAGGAAGACTTCCCAATAGATCATTTTGTAGTGCAAGATCTTGAAGGGTTGTGCATAGTCAATTGTCCCAATTTGAAAACCTTGGTACCACCATCGTTCTCTTTAAAAAATTTAACCGATTTAGAGGTGGTAAATTGCAAAGGATTGATTTATTTAATAACAACTGAAACAGCCAAAAGTCTTGTACAGCTCAAAAGATTAAAAATAGAAAAATGTGAGATGTTGTTGGATGCTGTGAAGATTAATGAAGATAAAGCTGATGAAGACATAATATTTGAAAACTTGGAAATCATGGATTTCACTTCTTTGTCAAGTTTGAGAAGCTTCTGCTATGGGAAACAAACATTCATATTTCCATCTTTGCTACATCTTATTGTTGAAGGATGCCCTCAAATGGAGCTTTTCTCATCAGGAGTTACAATAGCACCATTCTTGACAGCAGTTCAAGTCAAAAACAACAAGAAGAGATGGAAAGATGATCTTAATGCCACTATCAAACAGTTATTCGTAGATCAGGAAGTCTCAAGTTCTACTGAGAAATAA 6291 0.3667 MWKILLCFVQQSMTVYIELNKIKEIISLDSPTYNISYFHFHSFSSHKEEEYIEGSDGDSYSLAAKVAEYTVAPIGRQANHLLSYKGNFKELADRVNELEAERVTTNHAIEHERRNLREIKPNVLKWLEEANKIIEKANQLQRDPRCSKVGCSVRLFPNLILRHQLSRKAKKITQEVVQVLNKGKFDQVGYHPPLDSAAFFNSFSTRGGVTFETRELFKKEIVKALEDSNACNIGIYGLGGVGKTTLVKEVAQIARQHKLFDVVVMANISKTPDIKRIQKEIAEQLDLPFGKETIAGRASRLRKRIKAEKTILVILDDMWPSFELEKAGIPLATQEEFTFRLDLLNEEETWRLFQFKAGEKVNDTLLQNVATQVARKCAGLPLIIVTVATGLKNKDIYAWKDVLRQLESAGHAEMEEITYSALELSYKWLASDELKALFLLFASLQGDDIEYILSVVVGLDIFKDIDTVDDARDKLYTIIDSLKASCLLNEGKIGEVQMGNIVRDVAINIAHRGYHVFQREGPDELKEWPTKDLIKCPHIILNGCHIHELPQRLDCPNIKFFYLYNVNPSLEIPDIFFEGMGSLRVLDLTLLNLSSLPTSFQSLTNLQTLTLYQCTLENIDAIGALKNLEILRLRKSSMIKLPKEIGNLTKIRLLDLSHSGIEVIPPNIISSLSKLEELYMGNTSIKWEDENSAKQNVNASLAELRQLSKLTALELQIREAWILPRDLKLMFEKLQRYKIAIGDVWEWPEIEDGTLKTLLMLKLGPNKHLEHGIKALIKEAESLYLDEVDGVQNVHFQLNSEGFPLLKHLHIQNNTKLKQIVDSMEKKQVQASFINLEKLVLQNLKNLEQICHGQLAINSFGKLSVIKVKNCAQLKYLLSYSMVKGLTQLSEIEVCQCNSMKEMVLLRPDSNVENSTNEKIEFLSLRSLTLKHLQKLDNFFSYESTSIRNEQKDQGLESYVSASFFNAQVAFPNLDTLELNSLNLNIIWGDNQHSFSKLTYLVVENCGGLKYLFLSSMVGSFINLKRLEISKCSLMEEIIDAKGKNNGTDVSNEVRFSKLEEIILKDMENLKTIWHHQFDSLKKLEVNNCEKITVVFPSSLQKTYNNVEKLDISYCASVEEIFELSSNEKGIKEDATHLKEITLSVMPKLKNIWSRDPQGILSFHNLENVSLDSCGSMKYLFPNSVATSCSHLEILGLVSCGNMKEIITEKKGSVCTTPIFEFNKLNTLMLWDLPKLKGFYAGTHTLTCPCLSSIFVSGCSKLNLFKSSLTSSMRIKFPNGKLPIAEEAPLFIVEKVNPDLEELIFDYRDAIMIWKDKNLGDNFTKIKHLGLLNGVTEEAIFPYWFLQNLPTLEQLTVDLSSFKKIFPDQRLVAEECSTRLKGLRLNQLPDLQYICEEGCQIDPVLKQLEQMEINSCPSLTILSPSSVTFSHMTYLAITNCDGMKKLITSPTARSLTNLTTMIVNNCNSLEEIITGSEGVSITLTSLEILMLECLPRLSKFCSSKSLLKLPLLEEVVVRECPRMKIFSEGNVSTPILRKVKTAEDVGKWDRNGNLNGTIKNMFEDKVAFCEFKHLTLAEYPEIKDLWYGQLQSNVFCNLTSLVVQQCDFLSDVLFPSNILQVLIGLQELEVRDCDSLETIFDVKGIQSKEILVKPTTELKKLTLSSLPKLKHIWNEDPHESISFGKLETVDVVKCQSLLNIFSLSLCQDLGHLKILRIWFCGVKEIVAVEEGSMKNNIRFPQMTELGLIGLTKLKNFYPGKHTLECPSLKILKVYQCEALKMFSFNHSGFKQPNQVDEIHDIDIPFQIALFSIEKVSSNMEDLALCGNDALKILSGCCPENLFQKVEFLRLQSFEETPITFLNGFHEMFPNVVTLQVRGSSFETLFLTAGIDHLNSQYPKQIRNLWLLDLEQLRIIWQEDFPIDHFVVQDLEGLCIVNCPNLKTLVPPSFSLKNLTDLEVVNCKGLIYLITTETAKSLVQLKRLKIEKCEMLLDAVKINEDKADEDIIFENLEIMDFTSLSSLRSFCYGKQTFIFPSLLHLIVEGCPQMELFSSGVTIAPFLTAVQVKNNKKRWKDDLNATIKQLFVDQEVSSSTEK 2096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01895 2096 Gene3D Ribonuclease Inhibitor 1803 2001 IPR032675 -
Trre1g01895 2096 SUPERFAMILY L domain-like 532 900 - -
Trre1g01895 2096 Gene3D Ribonuclease Inhibitor 524 800 IPR032675 -
Trre1g01895 2096 SUPERFAMILY RNI-like 1429 1721 - -
Trre1g01895 2096 PRINTS Disease resistance protein signature 232 247 - -
Trre1g01895 2096 PRINTS Disease resistance protein signature 646 662 - -
Trre1g01895 2096 PRINTS Disease resistance protein signature 305 319 - -
Trre1g01895 2096 PRINTS Disease resistance protein signature 377 391 - -
Trre1g01895 2096 SUPERFAMILY RNI-like 965 1206 - -
Trre1g01895 2096 Gene3D Ribonuclease Inhibitor 1316 1545 IPR032675 -
Trre1g01895 2096 Gene3D Ribonuclease Inhibitor 1091 1277 IPR032675 -
Trre1g01895 2096 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 211 440 IPR027417 -
Trre1g01895 2096 Pfam NB-ARC domain 219 335 IPR002182 GO:0043531
Trre1g01895 2096 SUPERFAMILY RNI-like 1136 1473 - -
Trre1g01895 2096 Coils Coil 123 143 - -
Trre1g01895 2096 Gene3D Ribonuclease Inhibitor 1581 1802 IPR032675 -
Trre1g01895 2096 Gene3D Ribonuclease Inhibitor 806 1044 IPR032675 -
Trre1g01895 2096 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1625 1783 - -
Trre1g01895 2096 SUPERFAMILY RNI-like 1842 2070 - -
Trre1g01895 2096 Coils Coil 81 115 - -
Trre1g01895 2096 Gene3D - 345 429 IPR042197 -
Trre1g01895 2096 Gene3D - 205 344 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01895 Trre-Chr1 15173135 15185443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01895 233 668 WRKY Transcription Factor Family AT5G45050 23.654 2.80e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01895 - - cam:101502322 2234.91