Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01887 ATGTCTGTGGAGGAATTGATACCACCAACTAATTCCAAATTTAAACTATACTCCATCCTCATCAGAACAGCACTAGTGATTTCTACACTGCTTGTTGGTCTTTCGGTTCCATTTTTCGGTTTGGTGATGTCGTTAATCGGGTCTTTGCTCACAATGTTTGTGTCCCTTATTCTACCAGCTGCTTGTTTCCTAAGCATCAAGCGCGGAAGAATCACACGCTCTCAGGTTATACTCTGTGTTACAGTGATCGTAGTAGGTTTAGTTTCATCTGGTTTTGGATCATACTCAGCCATCTCGGAGATTATAGCGGAGCTGTTTCCATGA 324 0.4228 MSVEELIPPTNSKFKLYSILIRTALVISTLLVGLSVPFFGLVMSLIGSLLTMFVSLILPAACFLSIKRGRITRSQVILCVTVIVVGLVSSGFGSYSAISEIIAELFP 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01887 107 Pfam Transmembrane amino acid transporter protein 9 98 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01887 Trre-Chr1 15127259 15128247 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01887 1 105 Amino Acid or Auxin Permease AAAP Family AT5G02180 51.429 2.21e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01887 K15015 - gmx:100781123 156.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g01887 1 15127259 15128247 Trre1g01887 1 15127259 15128247 ECH