Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01886 ATGAAAAATAGATGTTGTTCCTTAATCAGAAGTACATATGCTTTGAGTCTAACACCAGTAGCAATGTCTGTGGAGGAATTGATACCACCAACTAATTCCAAATTTAAACTATACTCCATCCTCATCAGAACAGCACTAGTGATTTCTACACTGCTTGTTGGTCTTTCGGTTCCATTTTTCGGTTTGGTGATGTCGTTAATCGGGTCTTTGCTCACAATGTTTGTGTCCCTTATTCTACCAGCTGCTTGTTTCCTAAGCATCAAGCGCGGAAGAATCACACGCTCTCAGGTTATACTCTGTGTTACAGTGATCGTAGTAGGTTTAGTTTCATCTGGTTTTGGATCATACTCAGCCATCTCGGAGATTATAGCGGAGCTGTTTCCATGA 387 0.4083 MKNRCCSLIRSTYALSLTPVAMSVEELIPPTNSKFKLYSILIRTALVISTLLVGLSVPFFGLVMSLIGSLLTMFVSLILPAACFLSIKRGRITRSQVILCVTVIVVGLVSSGFGSYSAISEIIAELFP 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01886 128 PANTHER OS05G0424000 PROTEIN-RELATED 11 110 - -
Trre1g01886 128 Pfam Transmembrane amino acid transporter protein 11 119 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01886 Trre-Chr1 15127259 15128310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01886 11 126 Amino Acid or Auxin Permease AAAP Family AT5G02180 50.862 4.93e-31 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01886 K15015 - gmx:100781123 171.785