Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01865 ATGGATATTCTAGTTTCTGTTGTTGAAAAACTTGCTGATTATACTGTTGTGCCAATTGGACGTCAAGCAGGTTACTTGATATTCTACAAAGGCAATTTCAAGATTTTAGCGACTCATGTTGTAGACCTTGAGGCTGAACGAGAGAGACTCGTCCATTCAATTGAAGAAGAAAGGGGAAATGGTAAAGAAATCGAAAGAGATGTGATGATCTGGTTGGAGAGAGTGAACGAGGTAATTGAAAGGGCAAATCAGCTTGATAAAGATCCTCGTCGTGCCAATGTCAGGTGCTCAACATGGCGGTTCCTCAATTTGATTTTACGACATCAACTAAGTAGGAAAGCCACAAAAATTGCAATAGATGTCGTTGAAGTTAAAGGAAAAGGGACGTTTGATCGAGTTGGTTACCATCCAGCTCTTGATAGAGTAGCCTCCTCTTCCTCAATAAGAGGTGGTGAAATGTATGAGACAAGGGAGTCACTTAAGGAGGATATTTTGAAGGCTTTATCAAACCCCAATTCACGCAACATTGGGATCTATGGTTTGGGTGGTGTGGGTAAGACCACTCTGGTGGAAGACATTAAGCTAATAGCAGAGCAACATAAATTGTTCGATAAAGTGGTTATAACACATGTATCTCAAAATCCAGACATTAAAACCATTCAAGGGGAGATTTCAGATTTGTTGGGTTTGCATTTCAAGGAGGAGACAATTCTTGGAAGAGAAAATTGCCTGAGACAAAGAATCAAGATGGAGAAAAGTATCCTTGTCATTCTAGATAATATATGGAGCAGACTTGATTTGAAGAAAGTGGGAATTCCATTTGGTAATGAACATAATGGTTGCAAATTATTGATGACAAGTAGAAATCAAGATGTGTTGCTGCAAATGGATGTTCCAAATGATTGTACTTTCCAACTTGAACTTATGAGTGAAAATGAGACGTGGAACTTGTTTCAGTTTATGGCTGGGGATGTGGTTAAAGATAGAAATTTGAAAGATCTACCATTTCAAGTTGCCAAAAAATGTGGAGGTTTGCCTCTTAGGGTAGTGACGGTGGCACGTGCAATGAGAAATAAGAGGGATGTCGAATCTTGGAATTATGCATTACGGAAATTACAAAGGAATGATGGTACAGATATGGATGCACTAACTTATTCTGCTTTGGAATTAAGTTACGACTCATTGGAGAGTGATGAAGTGAGGGAACTATTCTTACTGTTTTCATTACTCTTAGGTAATAATGTAGAGTACTTTCTGAAAGTTGCAATGGGTTTGAAAATATTAAAGCATAATGATACCATGAATGATGCAAGAAACAGTCTTTACACAATTATCAAATCTTTGGAGGCGACTTGTCTTTTGCTTGAAGTTAAAAAAAGTGGAAAGATCCAAATGCATGATTTCATTCGTGATTTTGCTACCTCTGTAGCATGTAGGGACAAACATGTATTTCTCAGTAAACAATCAAATGAGGATTGGCCAACCAATGATTTTTTAAAAAGGTGCACGCAGATCGTCATAAATTACTTTCCTATCCTTAGGCTTCCTCAAACTTTTAATTGTCCAAACATCAAGTTTTTCTGTTTAGGAAGTGTGAACCGCTCTTTAGAAATTCCAGATACTTTTTTTGAGGGTATGGGAAGCCTGACAACACTAGATTTAAGTTGCTTGAACTTGTCTTCGTTACCTACCTCAGTTCGGTTCCTAACTGACCTTAAAATGATGTGTTTGTATTCATGTGTTTTGGAAAATATAGATGCAATAGAAGCTTTGCAAAACTTAGAAATTCTTCAATTGTGGAAATGTTCAATGATCAAGTTGCCAAGCGAAATAGGGAAATTGAATAAATTGAGAATGCTTGATTTGACTAATTCAGGAATAGAAGTATTCCCATCCAACATCATATCTAGTTTGACTAAATTGGAAGAGTTATATATGGGTGATACCTCTATTAATTGGGAAGATGTGAATTCAATAGTTAACAATGGGAATGCTGGCATTGTTGAACTTCAGGAACTACCCAAGTTGACTGCCCTTGAATTACAAATTCGTGAGATTTGCATGTTGCCAAGGGGCTTGCAATTGATGTTTGAGAAGTTGAAATATTTTAAAATAGCCATTGGGGATGTTTGGGAATGGGCTGACATTAAGGATGGAACCTTGAAAACATTGATGCTCAAACTTGGTACTAACATACATTTGGAGCACGGAATTAAAGCATTGATTAAAGTTGTTGAGAATTTGTACTTGGATGATGTTGATGGAATTCAAAATATGCTTTATAACCTAAGCGGGGAAGGTTTTCCTTTGCTGAAACACCTCCACATCCAAAATAATGCAAACTTGAAGCACATTGTTGACTCTAAAGAGAGGAATCAAATTCTTGCGTCCTTTCCCATCTTGGAAACACTAGTACTTCACAATCTTAAAAACTTGGAGCATATATGTCATGGTCCACTTTCAATTACTTCTTTTGGAAGTCTCAGTGTTATCAAAGTCAAAAATTGCATCCAATTAAAGTATCTTTTCTCCTATACATTGGTTAAAGAACTTTCCCACCTTTCAGAAATTGAAGTCTTCCACTGCAATTTTATGACGAAGATTGTGCTCAAAGACAACAATTCAAGTGCAAATAATGATATAGATAATGAAAAAATTGATTTTCTTCTGTTGCGTTCTTTGACTTTAGAACATTTGGAAACAATTGATGATTTCTTCTCTTATCATAAGGAAAAATATCATGGTTTAGAGCCTGATGTTTCTGCCCCATTTTTCAATGCTCAGGTTGCATTTCCTAAATTGGATACCCTCAAATTGAGCTCACTCCTCAATTTGAATAAAATTTGGGATGACAAGTATGATTCAATGTACAACTTGACTAGCTTGATTGTGGATAATTGTGGCGGGTTGAAGTACTTATTCTCATCTACTGTGGTTGGAAGTTTTAAGAACCTCAAACACCTTGAAATAAGTAATTGTGCTATGATGGAGGAGATTATTAAAGCTAAAGAAGAGGGAAACAGTGCATCAGAAGAGGTTCATTTTTGCAAATTAGAGAAAATCATATTGAAGGACATGGACAACTTGAAGACAATATGGCACCGCCAATTTGAAACATTGAAGATATTGCAAGTGAACAACTGCAATACAATTGTGGTGGTTTTTCCCTCTTCAATGCAAAAAACATATAATAAGCTAGAGATATTGGAGGTTACAAATTGTGGTTTAGTGGAAGAAATATTTGAATTGAGCTTCAATGGAAGTAACAGTGTAGAAGATACAACACATTTGACAGAAGTTACTATAGATGGATTGCCAAAGCTGAAAAAGATATGGAGTAGGGATCCATATGGAATTCTTAGTTTTCAAAATCTAATAAATATAAAAGTAAAAAGTTGTGAGAGTTTGGAGTATCTATTACCACTTTCCGTAGCCACTCATTGCTCACATCTCAAGGAACTTGATATAAAACAATGTGGAAAGATGAAGGAAATTGTTGCAGAGGAGAAAGAATCTAGCAACGTGAATGCAGCTCCCATATTTGAGTTTAATCAACTGTGTTCTTTATTGCTTTGGAACTTACATAGACTCAAGGGTTTCTCTGCTAAAAAACATACCCTAGCATGTCCATATTTGAAGATAATTGATGTTGTCAATTGTCCAAACTTGAGTTTGTACAGAACTCTATCTACAAGAAGAAGATCCAATACTGAAGATGACAAACACTCTGTTTCAACGCAACAACCACTTTTCATTGTCGAACAGGTGATTCCAAATTTAGAGAAGTTGAGAATGAATCATAAGGATGCTAACATGATAATGCAAGCCCAAAACTCAAGTGGCCTATTCACAAAAATGAAATTTATTGGTTTGTATGGTTATAAGGATGAATATACATTTCCTTATTGGTTTCTTCAAAATGTGCGTAGTCTTGAGACACTATTTGTTGAACAGAGTTGCTTCAAGAAGATATTCCAAGGTGAAGAAAGAATGAGTGAGAAGACTCACACACAAATCAAAAGATTGTCATTGAATGCATTACCTAACCTTGAACATATATGTGACGAAGGATTTCGAATTGACTCAGTTCTTGAGTTGCTTGAATACTTGTGGGTTTACAGTTGTCATAGTCTGATAAATTTGCTGCCTTCCTCAGCCACCTTTACTCATTTGGTACAGTTAGAGATAAAAGATTGCAATGGGCTAACAAAATTAATTACATCTTCTACCGCACAAAGTTTGATCAAGCTCACAACACTAAAGATAGAAGCCTGTAATTCACTTGAAGAGATAATTCTTGGAGAGGAAAATGTTCACATTACATTTATTAGTTTACAAATATTGATGTTGGTATGTTTGCCAAACCTCAACCAATTTTGCTCTACTAAGTGCTTCTTCAAATTTCCCTTGTTGGAAGTAGTAATTGTGAGAGAATGTCCTCGCATGAAGGTTTTTTCTGAAGGACACACAAGTACACCAAATCTTCGGAAAGTTAAAATTGCAAAAAATGATGAAAAATGGTTTTGGACGGGAAACCTAAATGATACAATAAAAACCATGTTTGAAGATAAGTCAAAAGTTGGATTTCGTCATCAACCGAAAATATATGGAAGTCCTAATTCGGTGAATGAGACCATCATATCTTCACATTTGCAAGATGATGAGTTAGGAGGTCAAGATGCTATTGACGCAAACCCCGAGGAGTGA 4707 0.3597 MDILVSVVEKLADYTVVPIGRQAGYLIFYKGNFKILATHVVDLEAERERLVHSIEEERGNGKEIERDVMIWLERVNEVIERANQLDKDPRRANVRCSTWRFLNLILRHQLSRKATKIAIDVVEVKGKGTFDRVGYHPALDRVASSSSIRGGEMYETRESLKEDILKALSNPNSRNIGIYGLGGVGKTTLVEDIKLIAEQHKLFDKVVITHVSQNPDIKTIQGEISDLLGLHFKEETILGRENCLRQRIKMEKSILVILDNIWSRLDLKKVGIPFGNEHNGCKLLMTSRNQDVLLQMDVPNDCTFQLELMSENETWNLFQFMAGDVVKDRNLKDLPFQVAKKCGGLPLRVVTVARAMRNKRDVESWNYALRKLQRNDGTDMDALTYSALELSYDSLESDEVRELFLLFSLLLGNNVEYFLKVAMGLKILKHNDTMNDARNSLYTIIKSLEATCLLLEVKKSGKIQMHDFIRDFATSVACRDKHVFLSKQSNEDWPTNDFLKRCTQIVINYFPILRLPQTFNCPNIKFFCLGSVNRSLEIPDTFFEGMGSLTTLDLSCLNLSSLPTSVRFLTDLKMMCLYSCVLENIDAIEALQNLEILQLWKCSMIKLPSEIGKLNKLRMLDLTNSGIEVFPSNIISSLTKLEELYMGDTSINWEDVNSIVNNGNAGIVELQELPKLTALELQIREICMLPRGLQLMFEKLKYFKIAIGDVWEWADIKDGTLKTLMLKLGTNIHLEHGIKALIKVVENLYLDDVDGIQNMLYNLSGEGFPLLKHLHIQNNANLKHIVDSKERNQILASFPILETLVLHNLKNLEHICHGPLSITSFGSLSVIKVKNCIQLKYLFSYTLVKELSHLSEIEVFHCNFMTKIVLKDNNSSANNDIDNEKIDFLLLRSLTLEHLETIDDFFSYHKEKYHGLEPDVSAPFFNAQVAFPKLDTLKLSSLLNLNKIWDDKYDSMYNLTSLIVDNCGGLKYLFSSTVVGSFKNLKHLEISNCAMMEEIIKAKEEGNSASEEVHFCKLEKIILKDMDNLKTIWHRQFETLKILQVNNCNTIVVVFPSSMQKTYNKLEILEVTNCGLVEEIFELSFNGSNSVEDTTHLTEVTIDGLPKLKKIWSRDPYGILSFQNLINIKVKSCESLEYLLPLSVATHCSHLKELDIKQCGKMKEIVAEEKESSNVNAAPIFEFNQLCSLLLWNLHRLKGFSAKKHTLACPYLKIIDVVNCPNLSLYRTLSTRRRSNTEDDKHSVSTQQPLFIVEQVIPNLEKLRMNHKDANMIMQAQNSSGLFTKMKFIGLYGYKDEYTFPYWFLQNVRSLETLFVEQSCFKKIFQGEERMSEKTHTQIKRLSLNALPNLEHICDEGFRIDSVLELLEYLWVYSCHSLINLLPSSATFTHLVQLEIKDCNGLTKLITSSTAQSLIKLTTLKIEACNSLEEIILGEENVHITFISLQILMLVCLPNLNQFCSTKCFFKFPLLEVVIVRECPRMKVFSEGHTSTPNLRKVKIAKNDEKWFWTGNLNDTIKTMFEDKSKVGFRHQPKIYGSPNSVNETIISSHLQDDELGGQDAIDANPEE 1568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01865 1568 Gene3D - 146 301 IPR027417 -
Trre1g01865 1568 SUPERFAMILY L domain-like 464 883 - -
Trre1g01865 1568 SUPERFAMILY L domain-like 931 1496 - -
Trre1g01865 1568 PRINTS Disease resistance protein signature 980 996 - -
Trre1g01865 1568 PRINTS Disease resistance protein signature 175 190 - -
Trre1g01865 1568 PRINTS Disease resistance protein signature 342 356 - -
Trre1g01865 1568 PRINTS Disease resistance protein signature 248 262 - -
Trre1g01865 1568 Pfam NB-ARC domain 158 393 IPR002182 GO:0043531
Trre1g01865 1568 Gene3D Ribonuclease Inhibitor 1231 1507 IPR032675 -
Trre1g01865 1568 Gene3D - 308 396 IPR042197 -
Trre1g01865 1568 Coils Coil 40 60 - -
Trre1g01865 1568 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 406 IPR027417 -
Trre1g01865 1568 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1065 1224 - -
Trre1g01865 1568 SUPERFAMILY RNI-like 1109 1433 - -
Trre1g01865 1568 Gene3D Ribonuclease Inhibitor 920 1230 IPR032675 -
Trre1g01865 1568 Gene3D Ribonuclease Inhibitor 466 607 IPR032675 -
Trre1g01865 1568 Gene3D Ribonuclease Inhibitor 608 883 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01865 Trre-Chr1 14920873 14927986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01865 174 631 WRKY Transcription Factor Family AT5G45050 22.388 5.50e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01865 - - tpra:123924644 2259.95