LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre1g01855	ATGGATATTCTAGTTTCTGTTGTTGAAAAACTTGCTGATTATACTGTTGTGCCAATTGGACGTCAAGCAGGTTACTTGATATTCTACAAAGGCAATTTCAAGATTTTAGCGACTCATGTTGTAGACCTTGAGGCTGAACGAGAGAGACTCGTCCATTCAATTGAAGAAGAAAGGGGAAATGGTAAAGAAATCGAAAGAGATGTGATGATCTGGTTGGAGAGAGTGAACGAGGTAATTGAAAGGGCAAATCAGCTTGATAAAGATCCTCGTCGTGCCAATGTCAGGTGCTCAACATGGCGGTTCCCCAATTTGATTTTACGACATCAACTAAGTAGGAAAGCCACAAAAATTGCAATAGATGTCGTTGAAGTTAAAGGAAAAGGGACGTTTGATCGAGTTGGTTACCATCCAGCTCTTGATAGAGTAGCCTCCTCTTCCTCAATAAGAGGTGGTGAAATGTATGAGACAAGGGAGTCACTTAAGGAGGATATTTTGAAGGCTTTATCAAACCCCAATTCACGTAACATTGGGATCTATGGTTTGGGTGGTGTGGGTAAGACCACTCTGGTGGAAGACATTAAGCTAATAGCAGAGCAACATAAATTGTTCGATAAAGTGGTTATAACACATGTATCTCAAAATCCAGACATTAAAACCATTCAAGGGGAGATTTCAGATTTGTTGGGTTTGCATTTCAAGGAGGAGACAATTCTTGGAAGAGAAAATTGCCTGAGACAAAGAATCAAGATGGAGAAAAGTATCCTTGTCATTCTAGATAATATATGGAGCAGACTTGATTTGAAGAAAGTGGGAATTCCATTTGGTAATGAACATAATGGTTGCAAATTATTGATGACAAGTAGAAATCAAGATGTGTTGCTGCAAATGGATGTTCCAAATGATTGTACTTTCCAACTTGAACTTATGAGTGAAAATGAGACGTGGAACTTGTTTCAGTTTATGGCTGGGGATGTGGTTAAAGATAGAAATTTGAAAGATCTACCATTTCAAGTTGCCAAAAAATGTGGAGGTTTGCCTCTTAGGGTAGTGACGGTGGCACGTGCAATGAGAAATAAGAGGGATGTCGAATCTTGGAATTATGCATTACGGAAATTACAAAGGAATGATGGTACAGATATGGATGCACTAACTTATTCTGCTTTGGAATTAAGTTACGACTCATTGGAGAGTGATGAAGTGAGGGAACTATTCTTACTGTTTTCATTACTCTTAGGTAATAATGTAGAGTACTTTCTGAAAGTTGCAATGGGTTTGAAAATATTAAAGCATAATGATACCATGAATGATGCAAGAAACAGTCTTTACACAATTATCAAATCTTTGGAGGCGACTTGTCTTTTGCTTGAAGTTAAAAAAAGTGGAAAGATCCAAATGCATGATTTCATTCGTGATTTTGCTACCTCTGTAGCATGTAGGGACAAACATGTATTTCTCAGTAAACAATCAAATGAGGATTGGCCAACCAATGATTTTTTAAAAAGGTGCACGCAGATCGTCATAAATTACTTTCCTATCCTTAGGCTTCCTCAAACTTTTAATTGTCCAAACATCAAGTTTTTCTGTTTAGGAAGTGTGAACCGTTCTTTAGAAATTCCAGATACTTTTTTTGAGGGTATGGGAAGCCTGACAACACTAGATTTAAGTTGCTTGAACTTGTCTTCGTTACCTACCTCAGTTCGGTTCCTAACTGACCTTAAAATGATGTGTTTGTATTCATGTGTTTTGGAAAATATAGATGCAATAGAAGCTTTGCAAAACTTAGAAATTCTTCAATTGTGGAAATGTTCAATGATCAAGTTGCCAAGCGAAATAGGGAAATTGAATAAATTGAGAATGCTTGATTTGACTAATTCAGGAATAGAAGTATTCCCATCCAACATCATATCTAGTTTGACTAAATTGGAAGAGTTATATATGGGTGATACCTCTATTAATTGGGAAGATGTGAATTCAATAGTTAACAATGGGAATGCTGGCATTGTTGAACTTCAGGAACTACCCAAGTTGACTGCCCTTGAATTACAAATTCGTGAGATTTGCATGTTGCCAAGGGGCTTGCAATTGATGTTTGAGAAGTTGAAATATTTTAAAATAGCCATTGGGGATGTTTGGGAATGGGCTGACATTAAGGATGGAACCTTGAAAACATTGATGCTCAAACTTGGTACTAACATACATTTGGAGCACGGAATTAAAGCATTGATTAAAGTTGTTGAGAATTTGTACTTGGATGATGTTGATGGAATTCAAAATATGCTTTATAACCTAAGCGGGGAAGGTTTTCCTTTGCTGAAACACCTCCACATCCAAAATAATGCAAACTTGAAGCACATTGTTGACTCTAAAGAGAGGAATCAAATTCTTGCGTCCTTTCCCATCTTGGAAACACTAGTACTTCACAATCTTAAAAACTTGGAGCATATATGTCATGGTCCACTTTCAATTACTTCTTTTGGAAGTCTCAGTGTTATCAAAGTCAAAAATTGCATCCAATTAAAGTATCTTTTCTCCTATACATTGGTTAAAGAACTTTCCCACCTTTCAGAAATTGAAGTCTTCCACTGCAATTTTATGACGAAGATTGTGCTCAAAGACAACAATTCAAGTGCAAATAATGATATAGATAATGAAAAAATTGATTTTCTTCTGTTGCGTTCTTTGACTTTAGAACATTTGGAAACAATTGATGATTTCTTCTCTTATCATAAGGAAAAATATCATGGTTTAGAGCCTGATGTTTCTGCCCCATTTTTCAATGCTCAGGTTGCATTTCCTAAATTGGATACCCTCAAATTGAGCTCACTCCTCAATTTGAATAAAATTTGGGATGACAAGTATGATTCAATGTACAACTTGACTAGCTTGATTGTGGATAATTGTGGCGGGTTGAAGTACTTATTCTCATCTACTGTGGTTGGAAGTTTTAAGAACCTCAAACACCTTGAAATAAGTAATTGTGCTATGATGGAGGAGATTATTAAAGCTAAAGAAGAGGGAAACAGTGCATCAGAAGAGGTTCATTTTTGCAAATTAGAGAAAATCATATTGAAGGACATGGACAACTTGAAGACAATATGGCACCGCCAATTTGAAACATTGAAGATATTGCAAGTGAACAACTGCAATACAATTGTGGTGGTTTTTCCCTCTTCAATGCAAAAAACATATAATAAGCTAGAGATATTGGAGGTTACAAATTGTGGTTTAGTGGAAGAAATATTTGAATTGAGCTTCAATGGAAGTAACAGTGTAGAAGATACAACACATTTGACAGAAGTTACTATAGATGGATTGCCAAAGCTGAAAAAGATATGGAGTAGGGATCCATATGGAATTCTTAGTTTTCAAAATCTAATAAATATAAAAGTAAAAAGTTGTGAGAGTTTGGAGTATCTATTACCACTTTCCGTAGCCACTCATTGCTCACATCTCAAGGAACTTGATATAAAACAATGTGGAAAGATGAAGGAAATTGTTGCAGAGGAGAAAGAATCTAGCAACGTGAATGCAGCTCCCATATTTGAGTTTAATCAACTGTGTTCTTTATTGCTTTGGAACTTACATAGACTCAAGGGTTTCTCTGCTAAAAAACATACCCTAGCATGTCCATATTTGAAGATAATTGATGTTGTCAATTGTCCAAACTTGAGTTTGTACAGAACTCTATCTACAAGAAGAAGATCCAATACTGAAGATGACAAACACTCAGTTTCAACGCAACAACCACTTTTCATTGTCGAACAGGTGATTCCAAATTTAGAGAAGTTGAGAATGAATCATAAGGATGCTAACATGATAATGCAAGCCCAAAACTCAAGTGGCCTATTCACAAAAATGAAATTTATTGGTTTGTATGGTTATAAGGATGAATATACATTTCCTTATTGGTTTCTTCAAAATGTGCGTAGTCTTGAGACACTATTTGTTGAACAGAGTTGCTTCAAGAAGATATTCCAAGGTGAAGAAAGAATGAGTGAGAAGACTCACACACAAATCAAAAGATTGTCATTGAATGCATTACCTAACCTTGAACATATATGTGACGAAGGATTTCGAATTGACTCAGTTCTTGAGTTGCTTGAATACTTGTGGGTTTACAGTTGTCATAGTCTGATAAATTTGCTGCCTTCCTCAGCCACCTTTACTCATTTGGTACAGTTAGAGATAAAAGATTGCAATGGGCTAACAAAATTAATTACATCTTCTACCGCACAAAGTTTGATCAAGCTCACAACACTAAAGATAGAAGCCTGTAATTCACTTGAAGAGATAATTCTTGGAGAGGAAAATGTTCACATTACATTTATTAGTTTACAAATATTGATGTTGGTATGTTTGCCAAACCTCAACCAATTTTGCTCTACTAAGTGCTTCTTCAAATTTCCCTTGTTGGAAGTAGTAATTGTGAGAGAATGTCCTCGCATGAAGGTTTTTTCTGAAGGACACACAAGTACACCAAATCTTCGGAAAGTTAAAATTGCAAAAAATGATGAAAAATGGTTTTGGACGGGAAACCTAAATGATACAATAAAAACCATGTTTGAAGATAAGTCAAAAGTTGGATTTCGTCATCAACCGAAAATATATGGAAGTCCTAATTCGGTGAATGAGACCATCATATCTTCACATTTGCAAGATGATGAGTTAGGAGGTCAAGATGCTATTGACGCAAACCCCGAGGAGTGA	4707	0.3595	MDILVSVVEKLADYTVVPIGRQAGYLIFYKGNFKILATHVVDLEAERERLVHSIEEERGNGKEIERDVMIWLERVNEVIERANQLDKDPRRANVRCSTWRFPNLILRHQLSRKATKIAIDVVEVKGKGTFDRVGYHPALDRVASSSSIRGGEMYETRESLKEDILKALSNPNSRNIGIYGLGGVGKTTLVEDIKLIAEQHKLFDKVVITHVSQNPDIKTIQGEISDLLGLHFKEETILGRENCLRQRIKMEKSILVILDNIWSRLDLKKVGIPFGNEHNGCKLLMTSRNQDVLLQMDVPNDCTFQLELMSENETWNLFQFMAGDVVKDRNLKDLPFQVAKKCGGLPLRVVTVARAMRNKRDVESWNYALRKLQRNDGTDMDALTYSALELSYDSLESDEVRELFLLFSLLLGNNVEYFLKVAMGLKILKHNDTMNDARNSLYTIIKSLEATCLLLEVKKSGKIQMHDFIRDFATSVACRDKHVFLSKQSNEDWPTNDFLKRCTQIVINYFPILRLPQTFNCPNIKFFCLGSVNRSLEIPDTFFEGMGSLTTLDLSCLNLSSLPTSVRFLTDLKMMCLYSCVLENIDAIEALQNLEILQLWKCSMIKLPSEIGKLNKLRMLDLTNSGIEVFPSNIISSLTKLEELYMGDTSINWEDVNSIVNNGNAGIVELQELPKLTALELQIREICMLPRGLQLMFEKLKYFKIAIGDVWEWADIKDGTLKTLMLKLGTNIHLEHGIKALIKVVENLYLDDVDGIQNMLYNLSGEGFPLLKHLHIQNNANLKHIVDSKERNQILASFPILETLVLHNLKNLEHICHGPLSITSFGSLSVIKVKNCIQLKYLFSYTLVKELSHLSEIEVFHCNFMTKIVLKDNNSSANNDIDNEKIDFLLLRSLTLEHLETIDDFFSYHKEKYHGLEPDVSAPFFNAQVAFPKLDTLKLSSLLNLNKIWDDKYDSMYNLTSLIVDNCGGLKYLFSSTVVGSFKNLKHLEISNCAMMEEIIKAKEEGNSASEEVHFCKLEKIILKDMDNLKTIWHRQFETLKILQVNNCNTIVVVFPSSMQKTYNKLEILEVTNCGLVEEIFELSFNGSNSVEDTTHLTEVTIDGLPKLKKIWSRDPYGILSFQNLINIKVKSCESLEYLLPLSVATHCSHLKELDIKQCGKMKEIVAEEKESSNVNAAPIFEFNQLCSLLLWNLHRLKGFSAKKHTLACPYLKIIDVVNCPNLSLYRTLSTRRRSNTEDDKHSVSTQQPLFIVEQVIPNLEKLRMNHKDANMIMQAQNSSGLFTKMKFIGLYGYKDEYTFPYWFLQNVRSLETLFVEQSCFKKIFQGEERMSEKTHTQIKRLSLNALPNLEHICDEGFRIDSVLELLEYLWVYSCHSLINLLPSSATFTHLVQLEIKDCNGLTKLITSSTAQSLIKLTTLKIEACNSLEEIILGEENVHITFISLQILMLVCLPNLNQFCSTKCFFKFPLLEVVIVRECPRMKVFSEGHTSTPNLRKVKIAKNDEKWFWTGNLNDTIKTMFEDKSKVGFRHQPKIYGSPNSVNETIISSHLQDDELGGQDAIDANPEE	1568

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre1g01855	1568	SUPERFAMILY	L domain-like	464	883	-	-
	Trre1g01855	1568	Gene3D	Ribonuclease Inhibitor	608	883	IPR032675	-
	Trre1g01855	1568	SUPERFAMILY	L domain-like	931	1496	-	-
	Trre1g01855	1568	Gene3D	Ribonuclease Inhibitor	1231	1507	IPR032675	-
	Trre1g01855	1568	PRINTS	Disease resistance protein signature	980	996	-	-
	Trre1g01855	1568	PRINTS	Disease resistance protein signature	175	190	-	-
	Trre1g01855	1568	PRINTS	Disease resistance protein signature	342	356	-	-
	Trre1g01855	1568	PRINTS	Disease resistance protein signature	248	262	-	-
	Trre1g01855	1568	Gene3D	-	308	396	IPR042197	-
	Trre1g01855	1568	Coils	Coil	40	60	-	-
	Trre1g01855	1568	PANTHER	NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED	1065	1224	-	-
	Trre1g01855	1568	Pfam	NB-ARC domain	158	393	IPR002182	GO:0043531
	Trre1g01855	1568	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	154	406	IPR027417	-
	Trre1g01855	1568	SUPERFAMILY	RNI-like	1109	1433	-	-
	Trre1g01855	1568	Gene3D	Ribonuclease Inhibitor	920	1230	IPR032675	-
	Trre1g01855	1568	Gene3D	-	146	301	IPR027417	-
	Trre1g01855	1568	Gene3D	Ribonuclease Inhibitor	466	607	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre1g01855	Trre-Chr1	14758497	14765585	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre1g01855	174	631	WRKY Transcription Factor Family	AT5G45050	22.388	5.32e-12	69.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre1g01855	-		-	tpra:123924644	2263.8