Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01794 ATGTTTATGTTTTTATTTCTCTTTACTTTGCTAATCAAAACTCTAACAACTACAACAAGCACTGTAATTAATCCAACTACATTCTCCTTTATTTCTTTTAGTCCTGAAAGTTGCAACAATGGTGAATTACTTTGTATGGGATCAGCCACTTCAGGAAATGGTTATGTAAGTCTCACACCAGAGCCAGATGAAGAACAAAACATAATAAATTCAGGTTCATCTAATATAGATAACAAAGTAGGAAGGGTTTTGTACCCTCATCCAGTTCATGTTTGGCCAGCAATTATTACCACAACATTCACTCTTAGGATCACTCCGTTTGCGGAAAACTCGACTGGCTCTGGTGATGGAATGGCACTTGTATTTGCACAAGATAATAGGCCTTCTCCAAATGATAGCTATGGTTCATATCTTGGCATGTTTGATAGGTCTACACAAGGTGGAAATTTTCAACAAATAGGTGTGGAATTGGACACATTTATGAATGAATTTGATCCAGATGGAAACCACATTGGCATAGTGACAACAAGCATAACAAATCCAGTTGCTTTTCATAGTCTCAATAACACTGAAGTTGACCTCAAAAGTGGAAGAGACATTGAGGTTAAAGTTGACTATAATGGATGGACTAAAATGATTTCTATCTCAATTGGATACTCAAATAGCCAATTAAAGAGTGTTCTAAACCATTCAATTAACTTACCTGATATAATTCCAAGCTCAGTTTATGTCGGTTTCACAGCCTCAACTGGCAAGACTTTGCCCGAAACTCATCAAATCCTAAATTGGTTTTTCACGTCAGTGCCGTTGCCTGTTCTTTCTGTTAAGCACAGTGATATTAGAAAATTCAAGATCATAATGATGATTGTCATACCAGTTCTTGTGTTATTTACCTTACTTTCTGTTGGTTGGGAAGCTTGGAAAAGAAGATACGAGAAAGGTGATCGTAAAGAGGACATAGAAAGCCTATCAAGGACGGCTGCGGATGCGCCTAAGATGTTCGGTTACAAGGAACTGTCAAAAGCCACTTGTAAGTTCAGTAAAGAAAATCTTGTCGGAAGAGGTGGATTTGGAAGTGTTTATAAAGGATTCATGTTAGAAAATGGAAAAACCATAGCAGTAAAGAAAATTTCAGCAACTTCTAAGCAAGGTGAAAGAGAGTTCTTGGCCGAAATATATTCTTTGTTTAGGCCAAAGATGAGAAAAGTTGTGCACATTTTTTTGAATCCAAATGAACCTTTAATGGAATTGCCGGAAATGCGACCGGCTGGTGTTTATGTATCATTTTCTTGTACTTCAATGACATATTTTGGATCTAGAACTGATTTACAGCTTCAATCATCCACAACATCAATGGAGAACATTTCTACTTGTATAGAGTATGACCGGTAG 1392 0.3685 MFMFLFLFTLLIKTLTTTTSTVINPTTFSFISFSPESCNNGELLCMGSATSGNGYVSLTPEPDEEQNIINSGSSNIDNKVGRVLYPHPVHVWPAIITTTFTLRITPFAENSTGSGDGMALVFAQDNRPSPNDSYGSYLGMFDRSTQGGNFQQIGVELDTFMNEFDPDGNHIGIVTTSITNPVAFHSLNNTEVDLKSGRDIEVKVDYNGWTKMISISIGYSNSQLKSVLNHSINLPDIIPSSVYVGFTASTGKTLPETHQILNWFFTSVPLPVLSVKHSDIRKFKIIMMIVIPVLVLFTLLSVGWEAWKRRYEKGDRKEDIESLSRTAADAPKMFGYKELSKATCKFSKENLVGRGGFGSVYKGFMLENGKTIAVKKISATSKQGEREFLAEIYSLFRPKMRKVVHIFLNPNEPLMELPEMRPAGVYVSFSCTSMTYFGSRTDLQLQSSTTSMENISTCIEYDR 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01794 463 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 2 271 - -
Trre1g01794 463 CDD lectin_legume_LecRK_Arcelin_ConA 26 267 IPR001220 GO:0030246
Trre1g01794 463 FunFam Putative L-type lectin-domain containing receptor kinase S.7 24 278 - -
Trre1g01794 463 ProSitePatterns Protein kinases ATP-binding region signature. 352 376 IPR017441 GO:0005524
Trre1g01794 463 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 268 IPR013320 -
Trre1g01794 463 SUPERFAMILY Protein kinase-like (PK-like) 329 406 IPR011009 -
Trre1g01794 463 ProSitePatterns Legume lectins beta-chain signature. 153 159 IPR019825 -
Trre1g01794 463 Gene3D Phosphorylase Kinase; domain 1 307 407 - -
Trre1g01794 463 Gene3D - 24 283 - -
Trre1g01794 463 ProSiteProfiles Protein kinase domain profile. 346 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g01794 463 Pfam Legume lectin domain 27 268 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01794 Trre-Chr1 13993315 13995945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01794 74 424 Receptor kinase-like Gene Family AT5G10530 29.223 6.28e-36 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Trre1g01794 Lectin_legB 2e-44 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01794 - - ccaj:109810929 533.872