Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01776 ATGGGAAAGCGAATTAGAGATAATAAAGAGGTTGGAGTGTCTAATGGAATCCATTGCCATCATACTCATCCAGGAAGAGTATGGGGAATTCTTCATATTATAAAGTATCATCATTGGCGTCATGTCAAGAGAAGGATATCACATAGAAGGCATTGTAATGGCGGAAGTCATGATGCAAGGGAAGACATTCCAGGAACTTCTAAAGATTCTGGGGTTGATAATGTGGCAGATCCTAATACTGCTTTATCCAATGTTGAAGAAAATAAGCTGGTACACTCCACTACTCCACATACCAAACATTCTATAAAATCAAGACTAAAATCACTTCTACATGAAGATATATACAAAAAGAAAGGTAGACATAAGAGAAGTTCAACCTGTCCTGCAAAGTCACAACTAACTCGCGTCGAATCCGTTCATCACGTCGAGGTTGATCCACTAAGTGAAATGTTATTAACTGTTGAAAATCCAGAACCAGTTATAGAAACTTTTCAAAACCATCTTGCTTCAGGAACATTAGAAGTTTTGTCACCAGTTTTCTCAGGTAGCAATAAATCAATCAACAGCAATAACAGTAACAATGATAAATGTGTTGAATGTGGTGCAATGTTTTCTAGTGATCCTTTACAACAACATGATGATAAGATTCATCATAAGCATCATAATCTATCAGTAAGTGAAGGTTTGCCTGAAGATAAATTGATGAATGCGAAAATATTTACGACCGATGCTTCACCACATCTTTTCAAGGATTTTCTTGATGCTTTAGAAGTAATCAACACAAACAAGGACTTTCTAATGAAATATATTAATGATCCGGGATCGCCTTTGCCATTCGAAATTCATAATCAACAACACTCTCCGAATTTTAAACCAAGACGCGCCAAATCAATTTCGTTACCTATTTATGGATCATCCTCAGGAACCAAAGATTCTGAGCATATGGTAGATAAATTGTTTGATGCAAATGGGAAGATACAATCACAAATTCAAAATTCAGGAGATTTAGACAAACCATCAACTTCTTCTTCACATAAAGTTGATGAGGTACGCAATTCGGATCAAGAATCGGTTGAACGAGATTCTAACAACGTTTCAAAAGATTCGTCACAGGTTCCAAATCAAGTGAAGCCTAGGAACTTCATGGATCTTAGAAAGAAGATAAAACATATAATTGAAGAAAGCAAAAACGAAAAGCGTCGTATTACAATGGATGCTATAGTCGACAAAATTCCTGGCGGAAATAGGTTTTCGGAAAATGTAAGGAAGTTGATTAACCATAGTCAGTCCAAATGTCACAATGGAGAAGGAAAAGAGAGTGGAACAACAAACGGTTATTATGGTAATCGTCTTTCTAAGTCTTACTCGAAAAATAAGCGTCAGTTATCGAGTATGAGGACTTCGTCTCTAAAAGAATCGGTTAATCGATATTCTCAGCTTTATGATACTTGTTTTCAACATGAAGCAGCTAGCAATAATGAAGTCAAGTGTCCTAAAACTGAGAGCTTAAAATTGAAAACAGAAGAGAAAAGTTCTATCTTAAAGACACCAAAATCCTTTCAAAGGTTTCTCTCATTACCTAATCTAAAATCTCGACTCAATCAAAGTGAGGAATCTTCTATTCAATCATCTCCTCAGAATTTAATTAGAAAATCAGAAGACAAAACAATAAGCAGTGAGGAACCTTCTATGCAATCATCACCTCAGAATTCGATTCGAAAATATGAAGACAGAACCATAAGCACAAGTGATGATTTCTCAAAGAGTCAAATTCTGTCACCTACACTTTCTGATCATACAAATGAAGAAAGCATTGTGAATGATGATGAACAAAAACAAGATCATGTTAAGAGTGATTCTGAATCAGAATCAGAATCAATATCAGAATCAAGATCAGATGTTAATGATGAGATAAAGTCAAATAAGAGTATAGTATTTGATGGTTTAGGAACCTTGAGAGGAAGTGAAAGTGCTGCTAGCATTGGATCTAGTGCTATGTTGGTTGAAGCAAACTCAAATTTTTCTTCTGAAGCTAGCTTCTTAGATTGTACATTTGAGTTGGAAAACTTAAATGGATTGGAAGATCAAGAATTAAAGCCAATGCCAGCTGATGATGAATTGAATAACATGTATGAGCAACAAGAGGCTAAAGATGAAAATTTTCTAAAATTTGGATATGAAATTCCAAGCATGGAAATTGATACAAATAATGAAGCTGCATATAATTATGTAAAAAAAGTTTTAGAACTCTCAGGCTTCACCAGCAATGAATCTCTTGGAACATGGTATTCAGATAATCAACCACTTGATCCATCAGTTTATGAAGAATTAGAAGGATGTTTACTTCTTGATCCTGATTGTTCTGGTAATTGTGATGAAGGTGGACAATGCAATCATCTTCTTTTATTTGATATAATCAATGAAGGATTATTAGAGATTTTTGGAAGATCATATAATTATTATCCTAGGCCTTTATCTTCTCTATCTTATGTTCATCCATTGCCAAATGGAGGAGATAATGTTTTGCATAAAGTATGGAAACTTATTAGTTGGTATCTTAATTCAGCTCCTGATTATAATGAGGCTTATACATCATTGGATTACTACGTTGGTAAAGATTTAGCAAAAAATGATGGATGGATGAATCTTCAATTTGATTCTGAATGTGTTGGGCTTGAGATAGATGATTTGATTTTTGATGATCTCTTGGAGGAAATTATCTACACTTAA 2730 0.3443 MGKRIRDNKEVGVSNGIHCHHTHPGRVWGILHIIKYHHWRHVKRRISHRRHCNGGSHDAREDIPGTSKDSGVDNVADPNTALSNVEENKLVHSTTPHTKHSIKSRLKSLLHEDIYKKKGRHKRSSTCPAKSQLTRVESVHHVEVDPLSEMLLTVENPEPVIETFQNHLASGTLEVLSPVFSGSNKSINSNNSNNDKCVECGAMFSSDPLQQHDDKIHHKHHNLSVSEGLPEDKLMNAKIFTTDASPHLFKDFLDALEVINTNKDFLMKYINDPGSPLPFEIHNQQHSPNFKPRRAKSISLPIYGSSSGTKDSEHMVDKLFDANGKIQSQIQNSGDLDKPSTSSSHKVDEVRNSDQESVERDSNNVSKDSSQVPNQVKPRNFMDLRKKIKHIIEESKNEKRRITMDAIVDKIPGGNRFSENVRKLINHSQSKCHNGEGKESGTTNGYYGNRLSKSYSKNKRQLSSMRTSSLKESVNRYSQLYDTCFQHEAASNNEVKCPKTESLKLKTEEKSSILKTPKSFQRFLSLPNLKSRLNQSEESSIQSSPQNLIRKSEDKTISSEEPSMQSSPQNSIRKYEDRTISTSDDFSKSQILSPTLSDHTNEESIVNDDEQKQDHVKSDSESESESISESRSDVNDEIKSNKSIVFDGLGTLRGSESAASIGSSAMLVEANSNFSSEASFLDCTFELENLNGLEDQELKPMPADDELNNMYEQQEAKDENFLKFGYEIPSMEIDTNNEAAYNYVKKVLELSGFTSNESLGTWYSDNQPLDPSVYEELEGCLLLDPDCSGNCDEGGQCNHLLLFDIINEGLLEIFGRSYNYYPRPLSSLSYVHPLPNGGDNVLHKVWKLISWYLNSAPDYNEAYTSLDYYVGKDLAKNDGWMNLQFDSECVGLEIDDLIFDDLLEEIIYT 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01776 909 MobiDBLite consensus disorder prediction 329 381 - -
Trre1g01776 909 MobiDBLite consensus disorder prediction 50 74 - -
Trre1g01776 909 Pfam Domain of unknown function (DUF4378) 741 905 IPR025486 -
Trre1g01776 909 MobiDBLite consensus disorder prediction 341 363 - -
Trre1g01776 909 MobiDBLite consensus disorder prediction 52 67 - -
Trre1g01776 909 MobiDBLite consensus disorder prediction 430 467 - -
Trre1g01776 909 MobiDBLite consensus disorder prediction 532 635 - -
Trre1g01776 909 MobiDBLite consensus disorder prediction 584 601 - -
Trre1g01776 909 MobiDBLite consensus disorder prediction 602 635 - -
Trre1g01776 909 PANTHER PROTEIN TRM32 1 908 IPR044257 -
Trre1g01776 909 MobiDBLite consensus disorder prediction 559 576 - -
Trre1g01776 909 MobiDBLite consensus disorder prediction 532 552 - -
Trre1g01776 909 Pfam Protein of unknown function (DUF3741) 233 275 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01776 Trre-Chr1 13803451 13808075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01776 731 899 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 54.913 4.36e-56 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01776 - - psat:127093390 999.193