Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01752 ATGGTTTCTTTCTTCTTCTCTGCCGTAAGAAAGAACAACCCTTCCCGCTCTTCCTCCTCTGTTCTTACCGATGATGATGATGTTCATGATGATCGTGTATGTCTCCACGTTTCAGTGGGTGATCCTTGTTGCTCTTCCTGCCAAGAAACTCAACAACAATTCACCACCAACAAGAAACGAAAACTTCCCCAACAACAACAACAACAACAACAAACCCTCAAGAACAACAACAAGAAAGCACGCATCAACAACAACTGGAGGGATGAGGAACTGAAATCCTCGTCTGTCTGTCTTCATCTGATGTTGGCTTCCCCCTCATGTATACCAACCTGCATCCATCAAGCTGCTGCTGCTGATCATGATCATGATGATGAAGAATGGGAGATGAAGAAGGTTCTTGAAAAGAGTGATGTTTGTCTACATTTGAGTAGACTTTTGATCAAGAAAGAAGTTGCTCAACAATTCATCATTCCTGTCTTGATGTTGGCTGGTGCTTCTCAACAAGCTTCTTATAGCAAAGATGGAATCCAAGTTCAAGTAAGGGATGTCGATACCGACACTCTTCATACTCTCGTTTTCAAGATATGGAGTTCCGCAAAAAGCCACATTTTCACCAAGAGATGGCTCAAAGATTTTGTTCTAAGAAGGAACTTGAAGAAAGGAGATCAAATCGCCTTACGTTGGGACCAACGCAACAACCGATTTGATTTCTCGGTTCTGAGTCGGGCTTAA 732 0.4262 MVSFFFSAVRKNNPSRSSSSVLTDDDDVHDDRVCLHVSVGDPCCSSCQETQQQFTTNKKRKLPQQQQQQQQTLKNNNKKARINNNWRDEELKSSSVCLHLMLASPSCIPTCIHQAAAADHDHDDEEWEMKKVLEKSDVCLHLSRLLIKKEVAQQFIIPVLMLAGASQQASYSKDGIQVQVRDVDTDTLHTLVFKIWSSAKSHIFTKRWLKDFVLRRNLKKGDQIALRWDQRNNRFDFSVLSRA 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01752 243 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 57 242 - -
Trre1g01752 243 SUPERFAMILY DNA-binding pseudobarrel domain 124 240 IPR015300 -
Trre1g01752 243 CDD B3_DNA 127 241 IPR003340 GO:0003677
Trre1g01752 243 MobiDBLite consensus disorder prediction 58 80 - -
Trre1g01752 243 MobiDBLite consensus disorder prediction 58 85 - -
Trre1g01752 243 Gene3D - 118 239 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01752 Trre-Chr1 13547865 13548596 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01752 129 235 B3 DNA Binding Superfamily AT3G24650 26.168 3.32e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01752 - - tpra:123899240 249.21