Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01739 ATGATTAAGCTTGTGTGCTTAGATGTTGAAGGACCTTTCAAATATGGGATCTACCAATGGGCACTTTCTGTCATATCAAGCAATTCCTTGGCTGTCAAGATTCTTTATCCCATATTTTGGGGTTTGATGACTCTCAGCACTTTTGGAAATGATCTTGAACCCACAAGTAACTGGCTAGAAGTGATTTTCAGCATATGCATTGTACTCGCTGGACTACTATTTTTCACTCTGTTGATTGGTAACTTATCAATAGCAACAATGTTCCATCACATAACACGATCTAATGATATCTTTTGGATGGCTCTTATTGCAAACGCATGGTTGAACAATGACGAAGTCAGAAAAGCAATTCACACTGTAGAGAAAAGTGTAGCCAGTAGTTGGGATTTATGCACAAACAAAATTTCCTTCGATCATAACTTCCAGAGGATATTGAGCTCTTATATTCAGATTGCTGAGTTTGAGGAAATTCCTGAAGAGAAGAGACAAAAGCTGAGTGATGGTGATTTTGGTGAAAGTGCAGTCTGCAAGGAGCTATTCCTAATTGGAGTTTAA 555 0.382 MIKLVCLDVEGPFKYGIYQWALSVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICIVLAGLLFFTLLIGNLSIATMFHHITRSNDIFWMALIANAWLNNDEVRKAIHTVEKSVASSWDLCTNKISFDHNFQRILSSYIQIAEFEEIPEEKRQKLSDGDFGESAVCKELFLIGV 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01739 184 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 10 109 - -
Trre1g01739 184 SUPERFAMILY Voltage-gated potassium channels 26 83 - -
Trre1g01739 184 Gene3D - 102 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01739 Trre-Chr1 13458121 13459369 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01739 3 84 Ion Channels AT5G15410 81.707 5.88e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01739 K05391 - gmx:100810471 155.221