Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01738 ATGATTAAGCTTGTGTGCTTAGATGTTGAAGGACCTTTCAAATATGGGATCTACCAATGGGCACTTTCTGTCATATCAAGCAATTCCTTGGCTGTCAAGATTCTTTATCCCATATTTTGGGGTTTGATGACTCTCAGCACTTTTGGAAATGATCTTGAACCCACAAGTAACTGGCTAGAAGTGATTTTCAGCATATGCATTGTACTCGCTGGACTACTATTTTTCACTCTGTTGATTGGTAACTTATCAATAGCAACAATGTTCCATCACATCAGAAAAGCAATTCACACTGTAGAGAAAAGTGTAGCCAGTAGTTGGGATTTATGCACAAACAAAATTTCCTTCGATCATAACTTCCAGAGGATATTGAGCTCTTATATTCAGATTGCTGAGTTTGAGGAAATTCCTGAAGAGAAGAGACAAAAGCTGAGTGATGGTGATTTTGGTGAAAGTGCAGTCTGCAAGGAGCTATTCCTAATTGGAGTTTAA 489 0.3824 MIKLVCLDVEGPFKYGIYQWALSVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICIVLAGLLFFTLLIGNLSIATMFHHIRKAIHTVEKSVASSWDLCTNKISFDHNFQRILSSYIQIAEFEEIPEEKRQKLSDGDFGESAVCKELFLIGV 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01738 162 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 6 103 - -
Trre1g01738 162 SUPERFAMILY Voltage-gated potassium channels 26 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01738 Trre-Chr1 13458121 13459369 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01738 3 84 Ion Channels AT5G15410 81.707 1.72e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01738 K05391 - gmx:100810471 155.221