Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01737 ATGATTAAGCTTGTGTGCTTAGATGTTGAAGGACCTTTCAAATATGGGATCTACCAATGGGCACTTTCTGTCATATCAAGCAATTCCTTGGCTGTCAAGATTCTTTATCCCATATTTTGGGGTTTGATGACTCTCAGCACTTTTGGAAATGATCTTGAACCCACAAGTAACTGGCTAGAAGTGATTTTCAGCATATGCATTGTACTCGCTGGACTACTATTTTTCACTCTGTTGATTGTAACACGATCTAATGATATCTTTTGGATGGCTCTTATTGCAAACGCATGGTTGAACAATGACGAAGTCAGAAAAGCAATTCACACTGTAGAGAAAAGTGTAGCCAGTAGTTGGGATTTATGCACAAACAAAATTTCCTTCGATCATAACTTCCAGAGGATATTGAGCTCTTATATTCAGATTGCTGAGTTTGAGGAAATTCCTGAAGAGAAGAGACAAAAGCTGAGTGATGGTGATTTTGGTGAAAGTGCAGTCTGCAAGGAGCTATTCCTAATTGGAGTTTAA 522 0.3851 MIKLVCLDVEGPFKYGIYQWALSVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICIVLAGLLFFTLLIVTRSNDIFWMALIANAWLNNDEVRKAIHTVEKSVASSWDLCTNKISFDHNFQRILSSYIQIAEFEEIPEEKRQKLSDGDFGESAVCKELFLIGV 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01737 173 Gene3D - 91 125 - -
Trre1g01737 173 SUPERFAMILY Voltage-gated potassium channels 26 79 - -
Trre1g01737 173 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 6 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01737 Trre-Chr1 13458121 13459369 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01737 3 68 Ion Channels AT5G15410 84.848 1.38e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01737 K05391 - gmx:100810471 148.673