Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01722 ATGGCTCACTGCAATTCTTATTCATGTGTGGCTGATCATGTCCTAACTGTTGGGACAAATTGGGATCTTTCATTGAAGAAGAGAAAGATCATGAAGGAAAAGAGTGATCTTGGCAACGGCACTAATAATGATGATGCTGTTTGGAGAAATTGGGAAGACTGGGAATATTATCTTCCAATAAAGAAGAGAAAGATCAAGGGGAGAATTGGGGACTATTGTGAATATGATCTTCCATCGAAGAAGAGAATAATCGCCAACAAACAAGAAACTAAGAAGACTTGTAATGTTGATGATGAATGGGAGATCAAGAAGGTTCTTGAAACGAGCGATGTTTGTCGCGGTTTGAGTAGGCTTTTGTTGAAGAAAGAATTGACTCAAGAGTTCGTTATTCCGGTGTTGTTGGGTGGTGCTAAAGTTGCCGAGACAAATGGAGTGGAAGTTCAAGTATGGGACGTTGACACAAAGTCTCCTCATTCTCTCGTTTTCAAGATATGGACGTCCGCAAAAAGCCACGTGTTCACTACGGGATGGGTCAAAGATTTTGTTCTTAGAAGGAATCTAAAGAAAGGAGATAAAATTGGCTTACATTGGGATCAATATAACCGACGTTTTAATTTCTCCGTGATTTAG 630 0.3984 MAHCNSYSCVADHVLTVGTNWDLSLKKRKIMKEKSDLGNGTNNDDAVWRNWEDWEYYLPIKKRKIKGRIGDYCEYDLPSKKRIIANKQETKKTCNVDDEWEIKKVLETSDVCRGLSRLLLKKELTQEFVIPVLLGGAKVAETNGVEVQVWDVDTKSPHSLVFKIWTSAKSHVFTTGWVKDFVLRRNLKKGDKIGLHWDQYNRRFNFSVI 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01722 209 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 73 209 - -
Trre1g01722 209 Gene3D - 79 207 IPR015300 -
Trre1g01722 209 CDD B3_DNA 100 209 IPR003340 GO:0003677
Trre1g01722 209 SUPERFAMILY DNA-binding pseudobarrel domain 99 202 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01722 Trre-Chr1 13330560 13331189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01722 102 179 B3 DNA Binding Superfamily AT1G20600 37.179 6.68e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01722 - - tpra:123891951 236.113