Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre1g01698 | ATGCCTAACCGCATCAATGTTTGTGTCTGTCTATCACTTGGTGGTCGTTCTTGCCACCGTTTTCCCTACGGTTGTTTAACATTTGATGAGATCCATTTAACCAAGAAAAGAAAACGTGCCCAACAAGAAACCACTCAACTTTCAACAATGAACAATGTTGATGATCAATGGGAGATCAAGAAGGTCTTGAAATGGAGTGATGTAAGTTGCAGTTTGAAAAGACTTTTGTTGAATAAGGATTTTGCTTATGATTATGTAATTCCTGTGTTGACGGGTGGTCCTGGAGTTGCTTACCAGAAAGAAGGAGTGACAGTTCAAGTATGGGATGTTGACACAAAGTCTCTTCATTCTCTTGTTTTCAAGATATGGCCTTCTGCACCAAGTTATGTTTTCATCAAGACGTGGTTCGATGACTTTGTTCTTCGAAGGGGGTTGAAGGAAGGAGATGAAATCGGTCTTCATTGGGATCAGGCAAACCAACGATTTAATTTCTCAGTTCTTAATATAGCTCTTAGTTTATAA | 522 | 0.3927 | MPNRINVCVCLSLGGRSCHRFPYGCLTFDEIHLTKKRKRAQQETTQLSTMNNVDDQWEIKKVLKWSDVSCSLKRLLLNKDFAYDYVIPVLTGGPGVAYQKEGVTVQVWDVDTKSLHSLVFKIWPSAPSYVFIKTWFDDFVLRRGLKEGDEIGLHWDQANQRFNFSVLNIALSL | 173 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre1g01698 | 173 | SUPERFAMILY | DNA-binding pseudobarrel domain | 55 | 167 | IPR015300 | - | |
Trre1g01698 | 173 | Gene3D | - | 47 | 166 | IPR015300 | - | |
Trre1g01698 | 173 | PANTHER | TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED | 36 | 168 | - | - | |
Trre1g01698 | 173 | CDD | B3_DNA | 57 | 168 | IPR003340 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre1g01698 | Trre-Chr1 | 13160202 | 13160723 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre1g01698 | 59 | 156 | B3 DNA Binding Superfamily | AT3G24650 | 30.612 | 8.22e-07 | 46.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre1g01698 | - | - | tpra:123892005 | 245.358 |