Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01675 ATGGAAATTCTAACTGCCGTTGCTGGAAAAGTGGCAGATTATACTGTTGTGCCTATTGGACGTCAAGCAAGTTACTTGATATTCTACAAAGGTAATTTTAAGAAGTTAGCTGATCATGTCAAAGACCTACAGGCTGTAAGAGAAAGGATTATTCATTTGGTTGAAGAAGAAAGAGGAAACGGTAAAGAAATCGAAAGAGATGTGCTGAACTGGTTCGAGAAAGTGAACGAGGTCATTGAAAGAGCAAATCAGCTTCAAAAAGATCCTCGTCGTGCCAATGTGAGGTGCTCAACAATGGGGTGCCCCAATTTGATTTTGCGTCATCAACTAAGTAGGAACGCCACGAAAATTGCAGAAGATGTTATTCAAGTTCAAAGAAAAGGGATGTTTGATCGAGTTGGTTACCTTCCGACCCTAGATGGAGTAGCCACCTCTTCCTCAACAAGAGGTAGTGAAAATTATGAGACAAGGGAGTCACTTAAGAATGATATTGTGAAGGCTCTAGCAGACCTTAATTCATGCAACATCGGTGTCTATGGTTTCGGTGGGGTGGGCAAGACCACTCTAGTTGAAGAAGTGGCTAGAATAGCAAGGCAACAAAAATTGTTCGATAAAGTGGTTATAACACATGTATCCAAAAATCCAGACATAAAAACTATTCAAGGGGAGATTGCAGATTCGTTGCGTTTACAATTTGATGAGGAGACAATTTTTGGAAGAGCAGAACGCCTAAGACAAAGAATCAAGATGGAGAAACGCATTCTTGTCATTCTTGATAATATATGGACTATGCTTGATTTGAAGAACATAGGAATCCCAATTGGTAATGAACATAATGGTTGCAAATTATTGATGACATGTAGAAATCAAGACGTGTTGCTGCAAATGGATGTTCCAAAGGATTACACTTTCAAACTTGAACTTATGGAGGAAAACGAGGCATTGAGCTTGTTTCAATTGATGGCTGAGGATGTGGTTAATGATAGCAATTTGAAAGATGTAGCGATTCAAGTTGCCAAAAAATGTGAGGGTTTGCCTCTTAGGGTAGTGACAGTAGCACGTGCAATGAGAAATAAGAAGGATGTCCAATCTTGGAAAGATGCATTAAGGAAATTGCAAAGTGATGATCATATAGAGATGGACGCGTTAACTTATTCTGCTTTGGAATTGAGTTACAACTCATTGGAGAGTGATGAAATGAGGGATATCTTCTTGCTTTTAGCATTATTGCAAGGTGGTGATGTAGAGTACTTTCTGAAAGTTGCAATGGGTTTGGAAATATTGAAGCATGTTAATACCGTGGATGAGGCAAGAAACAAATTTCACACAATAATCAGATCTTTGGAGGTGACTTTTCTTTTGCTTGATGTCAAAGCAGGTGGAGTGATCCAAATGCATGACTTTGTTCATGATTTTGCCATATCCATAGCTCGTAGAGACAAACATGTATTTCTACGCAAAAATCCACATGAGGAATGGCCAACCAAGGATTTTTTAAAAAGGTGCACACAAATTGCTCTAACATTTTTTCAAAATGATGAGCTTCCTCAAACGATTTATTGTCCAAACATTAAGTTTTTCCATTTGTTGAGTGTGGACCGTTCTTTAGAAATCCCCAATACTTTTTTTGAGGGTATGAGAAGCCTTACCGCGCTAGATTTAACCCTCTTGAACCTGTCTTCATTACCCGCATCATTTCAGTTCCTTACAAACCTTCAAACATTGTGTTTGGATTTTTGCATTTTGGAAAATATGCAACCAATAGAAGCTTTGCAAAATTTAAAAATTCTCCGCCTCTGGCAATGTTCAATGACCAAGTTGCCAAGAGAAATAGGGAAATTGACTCAATTGAGAATGCTTGATTTGAGCAATTCAGTAATAGAAGTAGTCCCACCCAATATCTTATCATGCTTGATTAGATTAGAGGAGTTGTACATGGGCAATACCTCTATTAATTGGGAAGATGTGAATTCAACGACTCAAACTAAAAATGCTAGCATTGTTGAGCTTGGAAAACTACCAAACTTGGTTGCTCTAGAATTACAAATCCGCGAGACTTGGATGTTGCCAAGGGACTTGCAATTGATGTTTGAGAAGCTGGAAAGATATAAAATAGTTGTTGGAGATGTATGGGAATGGTCTGACATTAAGGATGGATCCTTAAATACATTGAAGCTCAAACTTGGCACCAACATACATTTGGAGCACGGAATTAAAGCATTGATTAAAGGTGTTGAGAATTTGTACGTGGATGATGTCGATGGAATTCAAAATGTGCTTTATCAACTAAATGGGGATGGATTTCCGTTGTTGAAACATCTCCATGTCCAAAATAATGCAAACATGAAGCACATTGTTGACTCTAAAGAGAGAAATCGAATCCACGTGTCCTTTCCCATCTTGGAAACATTGGTACTTCATAATCTTGAAAACTTGGAGCATATATGTCATGGTCCACTTTCAATAACTTCTTTTAGAAGTCTTAGTGCTATCAAAGTCAAAAATTGCATCCAGTTAAAATATATTTTGTCTTTCACAATGATTAAAGGACTTTCTTGCCTTTCTGAGATTGATATTTATGAGTGCAATTCTGTGAAGGAGATAGTGCTCGAAGACAACAGATTAAGTGCTAATAATGATATAACTAATGAAAAGATTGAGTTTCTTCAATTACGTTCTTTGAATTTAGAATATTTGGAGACACTTGAAAATTTCTCATCTTATCATTCGACGGATTCCAGAAGTACGCAAAAAAATCAAGGTTTAGAGTCATATGTTTCTTCACCATTTTTCAATGCCCAGGTTGTATTTCCTAATTTGCATACCCTTAAGTTGAACTCACTCCCCAATTTGAATAAAATTTGGGATGACAGTCATCATTCTATGTACAATCTGACCAGCTTGATTGTGGATGATTGTAAGGGGTTGAAGTACTTATTCTCTTCTGCTGCTGTTGCAAGTTTTATGAACCTCAAACAACTTGAAATAAAAAATTGTCCTATGATGGAAGAGATAATAGCTAAAGAGAGGGATAATGCATTAAAAGAGGTTCATTTTTTGAAATTAGAGGAAATCAAATTGTTTAACTTGAACTTGAAGAAAATATGGCACTGCCAATTTGAAACAGTGAAGATGTTGGAGGTTGAATATTGTGATAATATTGTGGCGGTTTTTCCTTCTTCAATGCAAAAAACATATAATAAGTTAGAGATGTTGAAGGTTAACTGTTGTATTTCAGTGGAAGAAATATTTGAATTGACTTTAAATGAAAGTAGTAGTGTAGAAGATGATATAACACAGTTGAAAGAAGTTAATATAATTTTAATGCCGAAGCTGAAAAAGATATGGAGTAGAGATCCTCAAGGAATTCTTAGTTTTCAAAATCTAACAAATATAAATCTACAAATGTGTGTAAGTTTTGAGCATCTATTACCACTTTCCATAGCCAGTCGTTGCTCACATCTCAGGGAACTTCATATAGCTGAATGTCGAAACATGAAGGAAATTGTTGCAGAGGAGAAAGAATCTAGTGTGAATGTGGCTCCCATATTTGAGTTTAATCAAATGAATACTTTAATCCTAAGGAACTTGGATAAACTTGAGGGTTTCTATACTAAAAAGCATATCCTAGCATGTCCATCATTGGAGAGAATTGATGTTTTCAACTGTGCAAAGTTGAATTTGTATAGAACTCTATCTACAAAAAGCTCCAATTTTCTAGATGACCAACATTCTGTTCTAGCGCATCAACCACTTTTCATTGTGGAAGAGGTGATTCCAAATTTGGAGATGTTGAGAATAGATAATAAGGAAGCAAACATGATATTGCAAGCACAAAACTTGAGTGGCCAATTCACAAAAATGACATCTCTTCTTTTGTATGGTTATAATAATGAAGATGCATTTCCTTATTGGTTTCTTCAAAATGCACGAAGTCTTGAGTCACTAGTTGTTGAAGAGAGTTGCTTTAAGAAGATATTCCAAGATGAAGGACAGATAAGTGAGAAGACTCCCACGCGACTCAAAAATCTGCATCTGATTAAATTACCTAAACTTCAACATATATGTGAGGAAGGATCCCAAATTGACCCAGTTCTTGAGGTCCTTCAAGTTTTATTGGTTACCAAGTGTTCTAATTTGATAAATTTATTGCCTTCCTCTGCCACCCTTAGTCATCTGGAATATCTGAAGGTAACTGATTGCAAAGGGCTAAAAAATTTAATTACATCTCAAGCGATGCAAAGTTTGGACAAACTCAGAACATTGAAGGTAGAAAACTGTGATTCACTTGAAGAAGTAATTACTGGAGATGAAAACATTCACATTACATTAATTAGTTTACAAAAGTTGGTTTTGAAACGTTTGTATAGCCTCAACCAATTTTGCTCTAAAAACTGCTCCTTAAAGTTTCCATTGTTAGAGGTAGTAACTCTGAGAGATTGTCCTCGCATGAAGGTTTTTTCCGAGGGATACACAAGTACACCAAATCTTCAAAAAGTTTCATTTGAAAAAAATGATGAAGGATGGCTTTGGAAGGGAAACATAAATGATACAATAACCAGCATAAAGGATGACTATCAAGAGCATTTGGATCTTCTAATAAGGACTAATGTTCACTCTCTACGTGATACACAAGAGGTAGATGAACAAGAAGTGGACGGTGAGACGAGACTTGGTTTGTGGGTAGATTTTTCTGGGAGAATGTCTCAAGGTCAGCGTTACAGCACTAGTGCTATGTCTGTTATTGAGATGCTTCGTCGAGAGGTAGCTGCAGCGCGTGAAGAGGCTGCTGCAGCAAACCAAAGAGCTGATGTATCTGATCAGCGTATAAAAAATTTGGAGAACAATATAGCAAATCTTGTGCAACGAATGACAACTTTAGAGAATCAATCGAGCAATTGTTCTTAA 4908 0.3651 MEILTAVAGKVADYTVVPIGRQASYLIFYKGNFKKLADHVKDLQAVRERIIHLVEEERGNGKEIERDVLNWFEKVNEVIERANQLQKDPRRANVRCSTMGCPNLILRHQLSRNATKIAEDVIQVQRKGMFDRVGYLPTLDGVATSSSTRGSENYETRESLKNDIVKALADLNSCNIGVYGFGGVGKTTLVEEVARIARQQKLFDKVVITHVSKNPDIKTIQGEIADSLRLQFDEETIFGRAERLRQRIKMEKRILVILDNIWTMLDLKNIGIPIGNEHNGCKLLMTCRNQDVLLQMDVPKDYTFKLELMEENEALSLFQLMAEDVVNDSNLKDVAIQVAKKCEGLPLRVVTVARAMRNKKDVQSWKDALRKLQSDDHIEMDALTYSALELSYNSLESDEMRDIFLLLALLQGGDVEYFLKVAMGLEILKHVNTVDEARNKFHTIIRSLEVTFLLLDVKAGGVIQMHDFVHDFAISIARRDKHVFLRKNPHEEWPTKDFLKRCTQIALTFFQNDELPQTIYCPNIKFFHLLSVDRSLEIPNTFFEGMRSLTALDLTLLNLSSLPASFQFLTNLQTLCLDFCILENMQPIEALQNLKILRLWQCSMTKLPREIGKLTQLRMLDLSNSVIEVVPPNILSCLIRLEELYMGNTSINWEDVNSTTQTKNASIVELGKLPNLVALELQIRETWMLPRDLQLMFEKLERYKIVVGDVWEWSDIKDGSLNTLKLKLGTNIHLEHGIKALIKGVENLYVDDVDGIQNVLYQLNGDGFPLLKHLHVQNNANMKHIVDSKERNRIHVSFPILETLVLHNLENLEHICHGPLSITSFRSLSAIKVKNCIQLKYILSFTMIKGLSCLSEIDIYECNSVKEIVLEDNRLSANNDITNEKIEFLQLRSLNLEYLETLENFSSYHSTDSRSTQKNQGLESYVSSPFFNAQVVFPNLHTLKLNSLPNLNKIWDDSHHSMYNLTSLIVDDCKGLKYLFSSAAVASFMNLKQLEIKNCPMMEEIIAKERDNALKEVHFLKLEEIKLFNLNLKKIWHCQFETVKMLEVEYCDNIVAVFPSSMQKTYNKLEMLKVNCCISVEEIFELTLNESSSVEDDITQLKEVNIILMPKLKKIWSRDPQGILSFQNLTNINLQMCVSFEHLLPLSIASRCSHLRELHIAECRNMKEIVAEEKESSVNVAPIFEFNQMNTLILRNLDKLEGFYTKKHILACPSLERIDVFNCAKLNLYRTLSTKSSNFLDDQHSVLAHQPLFIVEEVIPNLEMLRIDNKEANMILQAQNLSGQFTKMTSLLLYGYNNEDAFPYWFLQNARSLESLVVEESCFKKIFQDEGQISEKTPTRLKNLHLIKLPKLQHICEEGSQIDPVLEVLQVLLVTKCSNLINLLPSSATLSHLEYLKVTDCKGLKNLITSQAMQSLDKLRTLKVENCDSLEEVITGDENIHITLISLQKLVLKRLYSLNQFCSKNCSLKFPLLEVVTLRDCPRMKVFSEGYTSTPNLQKVSFEKNDEGWLWKGNINDTITSIKDDYQEHLDLLIRTNVHSLRDTQEVDEQEVDGETRLGLWVDFSGRMSQGQRYSTSAMSVIEMLRREVAAAREEAAAANQRADVSDQRIKNLENNIANLVQRMTTLENQSSNCS 1635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01675 1635 PRINTS Disease resistance protein signature 248 262 - -
Trre1g01675 1635 PRINTS Disease resistance protein signature 175 190 - -
Trre1g01675 1635 PRINTS Disease resistance protein signature 612 628 - -
Trre1g01675 1635 PRINTS Disease resistance protein signature 342 356 - -
Trre1g01675 1635 Gene3D - 309 396 IPR042197 -
Trre1g01675 1635 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1285 1498 - -
Trre1g01675 1635 Gene3D Ribonuclease Inhibitor 1386 1508 IPR032675 -
Trre1g01675 1635 Coils Coil 1582 1630 - -
Trre1g01675 1635 SUPERFAMILY RNI-like 1282 1506 - -
Trre1g01675 1635 SUPERFAMILY L domain-like 464 836 - -
Trre1g01675 1635 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 407 IPR027417 -
Trre1g01675 1635 Pfam NB-ARC domain 158 392 IPR002182 GO:0043531
Trre1g01675 1635 Gene3D - 141 302 IPR027417 -
Trre1g01675 1635 SUPERFAMILY RNI-like 1113 1346 - -
Trre1g01675 1635 Gene3D Ribonuclease Inhibitor 501 923 IPR032675 -
Trre1g01675 1635 SUPERFAMILY L domain-like 797 1081 - -
Trre1g01675 1635 Gene3D Ribonuclease Inhibitor 931 1115 IPR032675 -
Trre1g01675 1635 Gene3D Ribonuclease Inhibitor 1123 1385 IPR032675 -
Trre1g01675 1635 Pfam Leucine rich repeat 593 650 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01675 Trre-Chr1 12950181 12956829 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01675 176 448 WRKY Transcription Factor Family AT5G45050 27.397 9.90e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01675 - - tpra:123924644 2188.3