Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01664 ATGGCAACAACAGAACCACTCGCTGAAGGCTCTACGCCCGAAGAAGTTGCGGCGGCGGTACCCGTTCCGGCACCGGAAGCAGGGTTAAAGCACAAACTAGAGAGAAAATGGACTTTCTGGTTCGATAACCAATCTAAACCTAAACAAGGTGCTGCTTGGGGAACATCTCTTCGCAAGGTTTACACATTCGATACCGTTGAAGAATTCTGGTGTTTGCATGATCAGATATTCAAGCCAAGCAAGTTACCTGCCAGTGCTGACTTTCACTTGTTTAAGGATGGGATTGAACCAAAATGGGAAGATCCTGAGTGTGCCAATGGAGGAAAGTGGACCCTTACCAGCAAAGGAAAGGGCAACCTTGATACCGTGTGGCTTGAAACGTTGATGGCTTTAATTGGGGAGCAATTTGGAGACTCTGAGGACATTTGTGGCGTAGTTGTGAGTGTGCGCCAGTGGCAGGACAAACTTTCATTGTGGACCAAAACGGCAGCTAACGAGTCTGTCCAGATGGGCATTGGAAGGAAGTGGAAGGAAATCATTGATGTTAGCGACAAGATGACCTATAACTTTCATGAAGATTCTAAAAATCGGGGTGCAAAGGCTCGTTATACTGTATAA 618 0.466 MATTEPLAEGSTPEEVAAAVPVPAPEAGLKHKLERKWTFWFDNQSKPKQGAAWGTSLRKVYTFDTVEEFWCLHDQIFKPSKLPASADFHLFKDGIEPKWEDPECANGGKWTLTSKGKGNLDTVWLETLMALIGEQFGDSEDICGVVVSVRQWQDKLSLWTKTAANESVQMGIGRKWKEIIDVSDKMTYNFHEDSKNRGAKARYTV 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01664 205 Gene3D RNA Cap, Translation Initiation Factor Eif4e 25 205 IPR023398 -
Trre1g01664 205 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 19 196 IPR001040 GO:0003723|GO:0003743|GO:0006413
Trre1g01664 205 SUPERFAMILY eIF4e-like 11 201 IPR023398 -
Trre1g01664 205 Pfam Eukaryotic initiation factor 4E 32 189 IPR001040 GO:0003723|GO:0003743|GO:0006413
Trre1g01664 205 FunFam Eukaryotic translation initiation factor 4E 23 205 - -
Trre1g01664 205 ProSitePatterns Eukaryotic initiation factor 4E signature. 87 110 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01664 Trre-Chr1 12867524 12870084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01664 7 205 Eukaryotic Initiation Factors Gene Family AT5G35620 63.235 4.39e-86 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01664 K03259 - gmx:100499799 332.028