Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01628 ATGAAGGATGGAGGGCCTGGTGTTGAGGAAGTTGAACATGTTGATGCTGTTTTCATGTTGCTTAACTATATTTTTGCTTTTTCTACATCTGATTATATTCCATGGTTGAGGTTACTTGACTTAGATGGCCATAAGGGGAAGATAAAAAATGCAATGAGGATAATGAACAAGTATCATGATTCTATCATTGATGAGAGAATCAAACACTGGAACAATGGATCAAAGAATGTTGAAGAAGACATGCTAGATGTCTTGATTTCCCAGAAAGATGACAATAATAATCCATTATTGACAACGAAGGAAATCAAGGCACAAGCTATTGAATTGATGATGGCAATGGTAGACAATCCATCAAATGTGGTTGAGTGGATATTGGTAGAAATGTTAAATCAACCTGAATTATTTCAAAAAGCCACAGAAGAATTGGATAATATAGTTGGAAAAGATAGAATAGTTCAAGAATCAGATATTCCTAAACTCAATTTCTTGAAGGCTTGTACAAGAGAAGCTTTTCGCCTTCATCCTATAGCAGCTTTCAATGTTCCCCATGTTGCTATGAATGATACAATAGTTGGAAATTACTTGATACCAAAGGGTAGCCATATATTGCTCGAAAGAAGTGGTCTTGGGAAAAACCCAAAAGTTTGGAGTGAACCTTACAAATTCAAACCAGAACGTCATCTCAAGAGTGATGGATCTAATATAAATTTGACAGAGCCAAATTTAAAGTTCATATCTTTCAGTACAGGAAGGCGTGGTTGTCCGGGTGTCACACTTGGGACAACAATGACTATATTGCTATTAGCTAGGTTGCTTCATGGCTTCACTTGGAGTGCACCTTCTGATATATCAACAATTAATTATGCAGAATCCAATGGTCTTATGTTTCTAGATGAGCCATTGCAGGCTGTAGCAAAACCACGATTAGCAGCAAAATTGTATAACTTTGGTCACTAG 957 0.3657 MKDGGPGVEEVEHVDAVFMLLNYIFAFSTSDYIPWLRLLDLDGHKGKIKNAMRIMNKYHDSIIDERIKHWNNGSKNVEEDMLDVLISQKDDNNNPLLTTKEIKAQAIELMMAMVDNPSNVVEWILVEMLNQPELFQKATEELDNIVGKDRIVQESDIPKLNFLKACTREAFRLHPIAAFNVPHVAMNDTIVGNYLIPKGSHILLERSGLGKNPKVWSEPYKFKPERHLKSDGSNINLTEPNLKFISFSTGRRGCPGVTLGTTMTILLLARLLHGFTWSAPSDISTINYAESNGLMFLDEPLQAVAKPRLAAKLYNFGH 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01628 318 PANTHER CYTOCHROME P450 98A9 18 315 - -
Trre1g01628 318 Gene3D Cytochrome P450 2 314 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01628 318 PRINTS E-class P450 group I signature 121 147 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01628 318 PRINTS E-class P450 group I signature 164 182 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01628 318 PRINTS E-class P450 group I signature 254 277 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01628 318 PRINTS E-class P450 group I signature 205 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01628 318 PRINTS E-class P450 group I signature 244 254 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01628 318 SUPERFAMILY Cytochrome P450 11 308 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01628 318 Pfam Cytochrome P450 26 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01628 318 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 247 256 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01628 Trre-Chr1 12450397 12451919 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01628 3 314 Cytochrome P450 AT4G39950 57.372 1.83e-128 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01628 - K14984 lja:Lj0g3v0137329.1 480.33