Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01621 ATGGGTTACACTCCTAGTTTCATCTCGTCACTCCTTTGGCCTCTTTTTCATGTTATGTTTTTTGGTTTTATGGTAATAATCAAAGCCATAAGAAAAAGATCCCAGAATCCTAAGAAATATAAACTTCCACCAGGTCCAAAACCATGGCCAATAGTTGGTAATCTTCCTGAAATGCTTGCAAACAATTCTCCAACTAGATGGATACACAAAATAATGGAAGAAATGAACACTGAAATAGCATGTATCCGTCTAGGAAATGTCCATGTTATCCCTATTACTTGTCCCACCATTGCATGTGAATTCTTGAGAAAACATGATGCTGATTTTGCATCAAGACCACTAAGCATGGCCAGTGATATCATCTCCAATGGCTACTTGACAACAGTTCTTGTACCATATGGAAAAAGATGA 411 0.3747 MGYTPSFISSLLWPLFHVMFFGFMVIIKAIRKRSQNPKKYKLPPGPKPWPIVGNLPEMLANNSPTRWIHKIMEEMNTEIACIRLGNVHVIPITCPTIACEFLRKHDADFASRPLSMASDIISNGYLTTVLVPYGKR 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01621 136 PANTHER CYTOCHROME P450 98A9 14 135 - -
Trre1g01621 136 Gene3D Cytochrome P450 26 136 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01621 136 Pfam Cytochrome P450 43 119 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01621 136 SUPERFAMILY Cytochrome P450 36 131 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01621 Trre-Chr1 12432623 12433033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01621 11 136 Cytochrome P450 AT2G22330 51.587 3.26e-40 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01621 - K14984 lja:Lj3g3v0744720.1 177.948