Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01617 ATGTCAGGAGAACTAGGAGTGCTAAATGCACTTGATGTGGCAAAAACACAATTGTACCATTTCACTACAATTATCATAGCTGGAATGGGATTCTTCACTGATGCATATGATCTTTTCTGCATTTCCCTTGTGACAAAATTACTTGGAAGAATATATTACACAGAACCAAATGCACCAAAACCAGGAACACTTCCACCAAGTGTTCAATCAGCTGTTACTGGCGTCGCGCTAGTCGGAACTCTAGCAGGCCAATTGTTCTTTGGTTGGCTTGGAGACAAAATGGGAAGAAAAAAAGTTTATGGTTTAACACTTATTCTCATGGTTGTTTGTTCTGTTGCTTCAGGACTCTCTTTCGGATCAAGTCCAAAGAGTGTTATGGCAACACTTTGTTTCTTTAGGTTTTGGCTTGGTTTTGGAATTGGTGGTGATTATCCTCTTTCAGCTACAATCATGTCTGAATATGCAAATAAAAAAACTAGAGGAGCTTTTATAGCTGCTGTTTTTGCTATGCAAGGTTTTGGTATCTTAGGTGGTGGAATTATTGCATTGATTGTGGCTTCTATATTTGATCACAAATATAATGTTCCTACTTATGAAGAAAATGCAGCGGCGTCATTGATGTTGCCGCAATTTGATTATGTATGGAGACTTATTCTTATGTTTGGTGCTCTTCCGGCTGCATTGACGTACTATTGGCGAATGAAAATGCCCGAAACGGCTCGTTACACGGCTCTTGTTGCTAAGAATGCGAAACAGGCTACTGCGGATATGTCGAAGGTTTTGCAAGTTGAACTTGAAGTTGAAGAGGAAAAGGTGCAAAAGATTACTGGTGGTGACAAAAATCAGTATGGCTTGTTCAGCAAGGAATTCGCGAAGCGACACGGTTTGCATTTGCTTGGAACAACTAGTACTTGGTTTTTGTTGGATATTGCTTTCTATAGTCAGAATCTTTTCCAAAAGGATATTTTTACGGGAATCGGATGGATCCCTCCGGCGAAAGAAATGAATGCAATTCATGAGGTTTACAAGATTGCAAGAGCACAGACACTTATTGCATTGTTTAGTACTGTTCCGGGTTATTGGTTCACGGTAGCGTTTATTGATTACATGGGCCGTTTCGCTATCCAAATGATGGGATTCTTCTTCATGACTGTTTTCATGTTTGCTCTTGCTATACCATATGATCATTGGAAAAATAGTGACAGTAAAATTGGGTTTGTTGCAATGTACTCACTCACATTCTTCTTTGCTAATTTTGGTCCAAATGCTACAACATTTGTTGTTCCGGCAGAGATTTTTCCGGCTAGGTTAAGGTCCACTTGTCATGGAATTTCAGCTGCTGCAGGAAAGGCAGGAGCAATTGTTGGTGCATTTGGTTTCTTGTATGCTGCACAAAGTAAAAATCCTGCTGAGACCGATAAAGGGTATCCAACCGGTATTGGGATTAAGAACTCGCTTATTATGCTTGGTGTGATCAACTTTGCTGGGATGTTGTTCACTTTACTTGTTCCGGAATCGAAGGGGAAATCATTGGAGGAGTTAACCGGAGAGAATGAAGGAGAAGGTGATATAGAGGCTACTCAGCAAGAAGGGTCAAGGAATATTCGAAATGCTGCCACAGCCTAG 1626 0.4053 MSGELGVLNALDVAKTQLYHFTTIIIAGMGFFTDAYDLFCISLVTKLLGRIYYTEPNAPKPGTLPPSVQSAVTGVALVGTLAGQLFFGWLGDKMGRKKVYGLTLILMVVCSVASGLSFGSSPKSVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILGGGIIALIVASIFDHKYNVPTYEENAAASLMLPQFDYVWRLILMFGALPAALTYYWRMKMPETARYTALVAKNAKQATADMSKVLQVELEVEEEKVQKITGGDKNQYGLFSKEFAKRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFTGIGWIPPAKEMNAIHEVYKIARAQTLIALFSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYDHWKNSDSKIGFVAMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKNPAETDKGYPTGIGIKNSLIMLGVINFAGMLFTLLVPESKGKSLEELTGENEGEGDIEATQQEGSRNIRNAATA 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01617 541 SUPERFAMILY MFS general substrate transporter 11 514 IPR036259 -
Trre1g01617 541 Gene3D MFS general substrate transporter like domains 271 531 IPR036259 -
Trre1g01617 541 Gene3D MFS general substrate transporter like domains 19 267 IPR036259 -
Trre1g01617 541 CDD MFS_PhT 24 507 - -
Trre1g01617 541 Pfam Sugar (and other) transporter 25 514 IPR005828 GO:0016020|GO:0022857|GO:0055085
Trre1g01617 541 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 508 IPR020846 GO:0022857
Trre1g01617 541 NCBIfam phosphate:H+ symporter 10 517 IPR004738 GO:0005315|GO:0006817|GO:0016020
Trre1g01617 541 FunFam Inorganic phosphate transporter 1-6 19 529 - -
Trre1g01617 541 MobiDBLite consensus disorder prediction 525 541 - -
Trre1g01617 541 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 511 - -
Trre1g01617 541 MobiDBLite consensus disorder prediction 512 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01617 Trre-Chr1 12378935 12380560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01617 4 519 Inorganic Solute Cotransporters AT5G43360 80.233 0.0 854
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01617 K08176 - gmx:100780201 892.493