Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01545 ATGGATAATCCACAAAAAGATTTTCCATTAGGATTAGACGAAGAATCAGAAAAACAATATTCACTTCATTCTAATTTACTTCAACAATTCTCCACAATCTCTTCAATCGATAAGGCATGGATTTTCAATTCAAACAAAGATTCTTCTTCGCAGGGATTGATGTTTTCTGTGAGTCAACCGAATCTTCTAGCGAACAAGAGACGGAAGTTTATTCTGTCGTCTACGGTAACTAAACGGAGTGATGACGGTTCCGTTACGTTACAGTGGGCTCCGTTTCCAGTTGAGGTGTCTGGAGTTTCTGTTATGGTTCCGTCACCTTCTGGTTCGAAGCTTTTGATTGTTCGAAATGCTGAGAGTGATGGTGCTTGTAGGTTTGAAATTTGGAGTGGTTCTTGTCTTGAAAGGGAGTTTCATGTACCTCAATCCAAACATGGTTCTGTGTATACCGATGGATGGTTTGAGGGAATCTCTTGGAACTCAGATGAAACCCTTATAGCATATGTTGCTGAAGAGCCTTCCCCTGCAAAGCCTACATTCAATGATCAGGGCTACAAGAAAAGTGGTTCTGATGACAAGGATTCCAGCAGCTGGAAAGGTCAAGGAGATTGGGAGGAAGATTGGGGCGAAACATATGCGGGAAAGAGGCAGCCTGCACTTTTTGTTATAAACATCACTAGTGGAGAGGTTCAAGCCGTCAAAGGAATTGACAAATCTTTGAGTGTTGGCCAAGTTGTGTGGGCTCCATCAAATGAAGGCTCTGCGCAATATTTAGTCTTTGTTGGATGGTCATTTGAGACAAGAAAACTTGGTATTAAGTACTGCTATAACAGGCCTTGTGCATTATATGTAATTAAAGTGCCACACGAGTCAAAAACTAATGGAAATGACTCAACTGAAGATGCTCAGGCGCTTAACCTAACTCAAACCATAAGTAGTGCTTTCCTTCCACGGTTCAGCCCAGATGGAAAGTTTCTTGTATTTTTATCAGCAAGAAGTTCAGTTGACTCTGGAGCCCATTCTGCTACAAATTCACTTCATAGAATTGACTGGCCCAAGGAAGTGAAGTTTGATCAATCTGCAAAAGTTCATGATGTGATACCAGTTGTGCTGTGTGCTGAGGAGGATGGCTTTCCCGGGCTTTACTTTTCAAGTATCCTTAACAATCCATGGCTTTCCGATGGCCACACTTTGGTTATACCCTCTGTCTGGCACAGTAGTCAAGTTTTACTTTCTGTCAATGTGTTGAGCGGACAAATAAAACGGATCACTCCTGATGGCTGTAATTTCTCGTGGAGTCTCCTTACATTGCATGGGAACAATATTTTTGCTGTTTCTAGCAGTCCAGTAGATATTCCTCAAGTCAAGTATGGAACCTTTGTTGAGAAGGAAGCTGGTAATAATGAATGGAGTTGGTCAAATGTATCAAATCCCATATATAAATGCTCTGACAAGGTAAGTTCTTTGTTGTCCTCTCTTACGTTTAGTGTAATGAAGATCTCAGTCAAGGATGCTTCTAAGAACTCAACTAAAGGTTCTAGTAAACCCTATGAAGCTATATTTGTGTCATCAAAAACTAAGAAAAGTGACACATGTGATCCACTAATTGTGGTCCTTCATGGGGGACCACACTCTGTTTCGTTGTCAAGCTTCTCAAAGTCACATGCTTTTCTTTCTTCACTTGGATATAGCTTGTTGATTGTCAACTACAGAGGTTCATTGGGATTTGGCGAGGAAGCCTTACAATCTCTACCGGGGAATGTTGGATCTCAGGATGTCAATGATGTACTCACAGCTATTGATCATGTCATAGACTTGGGACTTGCAAGTCCATCAAAAATTGCGGTGCTTGGTGGTTCACATGGTGGCTTTTTGACAACCCACTTGATTGGCCAGGCACCAGAGAAGTTTGTTGCAGCAGCTGCTAGAAATCCTGTTTGTAACCTTGCGCTGATGGTTGGTACAACTGATATCCCTGATTGGTGCTATGTTGAGAGCTATGGAATCAAAGGAAGAGATAGGATTACCGAAGCACCTTCAGCAGAGGATCTAACTCTATTTTATAGCAAGTCTCCTATTGCCCACATTGCAAAGGTAAAAACACCAACAGTTTTTCTTTTAGGTGCTCAAGATCTTCGCGTCCCAATTTCAACCGGACTGCAATATGCTCGGGCTTTAAAGGAGAAAGGAGTCCCTGTTAAAGTCATCCTATTTCCAAATGACGTTCATGGAATTGAAAGGCCACAATCCGACTTTGAAAGCTTCCTCAGCATTGCTGCCTGGTTCAACAAGTATTGCAAATGA 2301 0.4176 MDNPQKDFPLGLDEESEKQYSLHSNLLQQFSTISSIDKAWIFNSNKDSSSQGLMFSVSQPNLLANKRRKFILSSTVTKRSDDGSVTLQWAPFPVEVSGVSVMVPSPSGSKLLIVRNAESDGACRFEIWSGSCLEREFHVPQSKHGSVYTDGWFEGISWNSDETLIAYVAEEPSPAKPTFNDQGYKKSGSDDKDSSSWKGQGDWEEDWGETYAGKRQPALFVINITSGEVQAVKGIDKSLSVGQVVWAPSNEGSAQYLVFVGWSFETRKLGIKYCYNRPCALYVIKVPHESKTNGNDSTEDAQALNLTQTISSAFLPRFSPDGKFLVFLSARSSVDSGAHSATNSLHRIDWPKEVKFDQSAKVHDVIPVVLCAEEDGFPGLYFSSILNNPWLSDGHTLVIPSVWHSSQVLLSVNVLSGQIKRITPDGCNFSWSLLTLHGNNIFAVSSSPVDIPQVKYGTFVEKEAGNNEWSWSNVSNPIYKCSDKVSSLLSSLTFSVMKISVKDASKNSTKGSSKPYEAIFVSSKTKKSDTCDPLIVVLHGGPHSVSLSSFSKSHAFLSSLGYSLLIVNYRGSLGFGEEALQSLPGNVGSQDVNDVLTAIDHVIDLGLASPSKIAVLGGSHGGFLTTHLIGQAPEKFVAAAARNPVCNLALMVGTTDIPDWCYVESYGIKGRDRITEAPSAEDLTLFYSKSPIAHIAKVKTPTVFLLGAQDLRVPISTGLQYARALKEKGVPVKVILFPNDVHGIERPQSDFESFLSIAAWFNKYCK 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01545 766 SUPERFAMILY alpha/beta-Hydrolases 526 765 IPR029058 -
Trre1g01545 766 MobiDBLite consensus disorder prediction 185 203 - -
Trre1g01545 766 Pfam Prolyl oligopeptidase family 549 765 IPR001375 GO:0006508|GO:0008236
Trre1g01545 766 SUPERFAMILY DPP6 N-terminal domain-like 89 449 - -
Trre1g01545 766 Pfam WD40-like Beta Propeller Repeat 314 336 IPR011659 -
Trre1g01545 766 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 17 289 IPR045550 -
Trre1g01545 766 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 13 765 - -
Trre1g01545 766 ProSitePatterns Prolyl endopeptidase family serine active site. 594 624 IPR002471 GO:0004252|GO:0006508
Trre1g01545 766 MobiDBLite consensus disorder prediction 173 203 - -
Trre1g01545 766 Gene3D alpha/beta hydrolase 509 764 IPR029058 -
Trre1g01545 766 FunFam Acylamino-acid-releasing enzyme 505 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01545 Trre-Chr1 11694681 11700948 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01545 533 749 Carbohydrate Esterase AT5G36210 27.189 2.76e-18 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01545 K01303 - gmx:100803600 1199.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g01545 1 11694681 11700948 Trre1g01545 1 11694681 11700948 ECH