Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01544 ATGGCAACCACTGAGGAAGAGAACTATGCTTCTTTCTCCAACTTACTTCCACACTTTACCAATATTCCCAACATTAACAAAGCATGGTTTTTCAACTCAAACACACTAGCAATGTTTTCTATTAACCAATCTGATCTTTTAACAAACAAGACCAAGACTTTGATTCTGTCCTGTAATGTTGTTAAAAAAGAAAATGATGGTTCTGTTGAGTTTCTGTGGGCTCCTTTTCCAATTGAGATGTGTGGTGTTGTTACTATGATTGTTCCTTCTCCTTCTGGTTCAAAGCTTTTAGTGATTCGGAATAAGGAGATTAAGGAAGAAGTGGTTTCTTGTTTTGAGATTTGGAGTTGTTCTTGCTTGGAGAAGGAGTTTCATATTCCTCAATCAATGCATGGATTAGTATATAATGATGGATGGTTTGAGGGTGTCTCTTGGAACTTCGACGAAACATTGATAGCATATGTAGCAGAAGAGCCCTCTCCTACAAAGCCAGTATTTAATAATATGGGCTACAAGAAAGGTGGTTGTGCTGAGAAAGATTTTGGTAGCTGGAAAGGTCAAGGAGACTGGGAGGACGGTTGGGGAGAAACATATTCTGCAAAGAGACGGCCTACACTTTTTGTCATCGACATCATTAGTGGAGAGGTACAAGCTGTCAAAGGAATTGACAAATCCTTGAGTGTTGGCCAAGTTGTGTGGGCTCCATTTATCGAAGGCTCGGAACAATATCTTGTTTTTGTCGGGTGGTCATCTGAGAAAAGAAAGCTTGGTATGAAGTACTGCTCTAACAGGCCGTGTGCATTGTATACTGTTAAAGCACTATATCACGAGTCAAAATCCGATGAACCAGAGCGCCACTCTTCAACTGAAGAATTATATGCACTGAACCTAACTCCGACAATAAGCAGTGCGCTTTTTCCGCGATTCAGTCCAAATGGAGAGTTTCTTGTATTTTTATCTGCAAAATGTGCTGTGGATTCTGGAGTGCACAATGCTACAAATTCACTTCATAGAATTGATTGGCCAACTGATAGAAAACTCTACCAATCTGCCAACATTTATGACATTATTCCTGTTGTAATGTGTGCCGAGGAGGGTTGTTTCCCCGGGCTCTATTGTACAAGTATCCATAATAATCCTTGGCTTTCTGACAATTGCACAATGATCATATCATCCATCTGGCACAGCTGTGAAGTTCTACTCTCTGTGAATGTGTTGAGTGGGGAAGTAATACGTATCACACCAGCAGACTCGACTTTCTCGTGGAATCTTCTTGCACTTGATGGGAACAATGTTCTTGCCATTTCTAGTAATCCAGTCAATGTTCCTCAAATTATGTATGGTAATGTCATTGAGAAGGAGAAGAAAAATACTATATGGAGTTGGTCTAAGATATCGAGTCCCATATTCAAATGCTCCGACAAGGTTAGATCTTCGCTGTTCTCTCTCCAGTGCAGTATACTGAAGATATCCGTCACAGATGCTTCTAATGATCCAACAAAAGGTTCTGCTAAACCTTTTGAAGCTATATTTGTGTCATCAAAAACCAAGAACAAGGATGTATTTGATCCATTAATTGTAATCCTTCACGGAGGGCCACAGGACGTGTCTTTGTCACACTTCTCGAAGTCTTGGGCGTTTCTATCGTCAGTCGGATACAGCTTGCTGATTGTAAATTACAGAGGTTCATTAGGATTTGGTGAGGAAGCATTACAATCTCTTCCGGGGAAAGTTGGATCTCAGGATGTCAACGATGTTCTCTCCGCGATAGATCATGTGATCAATTTGGGACTTGCTAGTCCGTCCAAGATTACGGTGATGGGAATTTCACATGGCGGCTTTTTGTCGACTCATTTGATTGGCCAGGCACCAGAGAAGTTTGTAGCAGCAGCTGCAATCAATCCTGTTTGTAACTTCGCGCTGATGGTTGGTACAACTGATATTCCTGATTGGTGCTATGTAGAGGCCTTTGGAACCAATGCCAGAAATCGCTTCACCGAAGCACCTTCAGAAGAAGAATTGACTTTCTTCTATAACAAGTCACCTATTTCGCACGTTTCAAAGGTAAAAACACCAACACTTTTCCTTTTAGGTGCTCAAGATCTTCGTGTTCCAATCTTCGATGGACTGCAAGTAACTTTAAGAGAGAAAGGAGTCGATACCAAAATCATTATGTTTCAAAATGATGTTCATGCACTCAAAAGGCCCCAATCTGAATGGGAATGTTTGCTTAACATTGTGGTGTGGTTCAACAAATACTGCAAATAA 2268 0.4083 MATTEEENYASFSNLLPHFTNIPNINKAWFFNSNTLAMFSINQSDLLTNKTKTLILSCNVVKKENDGSVEFLWAPFPIEMCGVVTMIVPSPSGSKLLVIRNKEIKEEVVSCFEIWSCSCLEKEFHIPQSMHGLVYNDGWFEGVSWNFDETLIAYVAEEPSPTKPVFNNMGYKKGGCAEKDFGSWKGQGDWEDGWGETYSAKRRPTLFVIDIISGEVQAVKGIDKSLSVGQVVWAPFIEGSEQYLVFVGWSSEKRKLGMKYCSNRPCALYTVKALYHESKSDEPERHSSTEELYALNLTPTISSALFPRFSPNGEFLVFLSAKCAVDSGVHNATNSLHRIDWPTDRKLYQSANIYDIIPVVMCAEEGCFPGLYCTSIHNNPWLSDNCTMIISSIWHSCEVLLSVNVLSGEVIRITPADSTFSWNLLALDGNNVLAISSNPVNVPQIMYGNVIEKEKKNTIWSWSKISSPIFKCSDKVRSSLFSLQCSILKISVTDASNDPTKGSAKPFEAIFVSSKTKNKDVFDPLIVILHGGPQDVSLSHFSKSWAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLSAIDHVINLGLASPSKITVMGISHGGFLSTHLIGQAPEKFVAAAAINPVCNFALMVGTTDIPDWCYVEAFGTNARNRFTEAPSEEELTFFYNKSPISHVSKVKTPTLFLLGAQDLRVPIFDGLQVTLREKGVDTKIIMFQNDVHALKRPQSEWECLLNIVVWFNKYCK 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01544 755 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 6 277 IPR045550 -
Trre1g01544 755 ProSitePatterns Prolyl endopeptidase family serine active site. 585 615 IPR002471 GO:0004252|GO:0006508
Trre1g01544 755 Pfam Prolyl oligopeptidase family 540 754 IPR001375 GO:0006508|GO:0008236
Trre1g01544 755 FunFam Acylamino-acid-releasing enzyme 496 754 - -
Trre1g01544 755 SUPERFAMILY DPP6 N-terminal domain-like 82 453 - -
Trre1g01544 755 SUPERFAMILY alpha/beta-Hydrolases 524 754 IPR029058 -
Trre1g01544 755 Gene3D alpha/beta hydrolase 505 753 IPR029058 -
Trre1g01544 755 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 3 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01544 Trre-Chr1 11682395 11687944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01544 524 752 Carbohydrate Esterase AT5G36210 23.377 1.78e-14 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01544 K01303 - gmx:100812681 1184.09