Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01539 ATGTCAGAAAGTACAAAGTCAATAGTGAGGAAGACAAGCATATCGCCAAGGAGTACTTGGATTAAGCTTGATGCTAATGGACATAGTTCTTTCCTCAATGTAGACAAGTATGAAATCATGCGTCAAGTTCATATTGACGCTCGTGATCTTAGAATTCTTGATCCCCTTCTCTCTTATCCTTCAACCATTCTAGGCAGAGAAGAGGTTATCGTTCTTAACCTAGAGCATATCAAGGCAATCATCACTGCTAAAGAGGTCTTTTTGCTAGACCCAACTAGTGAAGATGTAACGCATGTGGTTAGGGAACTACAAAGGAGATTGTCTAACATTGACACAAATCAAGGAGATGATGTTCAAGACAATAGTCCACTTGACATTGAAGTAGATGAAGATGATGAGACACCTTTCGAATTTCGAGCACTAGAGATATTTCTTGAAGCAATTTGTAGCTTCCTTGATGCACGAGCTGCAGATCTTGAGATGGATACTTATCCTACATTAGATGAACTTACCAACAAGGTCAGTAGTCGTAATTTGGAAAAAATTCGTAAATTGAAGATTGCAATGACAAGGTTGACTGCTAGAGTTCAAAAGATAAAAGAATCGATCGAACACTTAATGGATGATGATGAAAACATGGCTGATCTATACTTATCAAGAAAATTGGAAGGAGGAGCATCTTCACCTATAAATCAATCAGCTGCTGCAAATAATTGGATTGTTTCATCTCCAGGCACCAAAACATTTCTAAGAGATGAAAATGATGTGGATGAACTTGAAATGTTACTTGAGGCTTATTTCATGCAAATTGATGGCACTACTTCTAGATTATCTATTCTGCGAGGATATATTGATGATACAGAGGATTACATTAATATTCAGATTGACAACCATCGAAATCAGTTAATTCAGTTAGAGCTATTTCTTAATGCAGCAGAACTTTGTCAAGCATGTTATTCAGTGGTGACTGGAATATTTGGCATGAGTATACTATCTGGTTGGGAACACAATTATGATTACATGTTCAAATGGGTGGTTATTTTTACAGGACTCTTTTGCATTTCACTGTATCTCATCATAATTGCTTATGCTCGCAAAAAGGGATTGGTTGGATCATGA 1119 0.3691 MSESTKSIVRKTSISPRSTWIKLDANGHSSFLNVDKYEIMRQVHIDARDLRILDPLLSYPSTILGREEVIVLNLEHIKAIITAKEVFLLDPTSEDVTHVVRELQRRLSNIDTNQGDDVQDNSPLDIEVDEDDETPFEFRALEIFLEAICSFLDARAADLEMDTYPTLDELTNKVSSRNLEKIRKLKIAMTRLTARVQKIKESIEHLMDDDENMADLYLSRKLEGGASSPINQSAAANNWIVSSPGTKTFLRDENDVDELEMLLEAYFMQIDGTTSRLSILRGYIDDTEDYINIQIDNHRNQLIQLELFLNAAELCQACYSVVTGIFGMSILSGWEHNYDYMFKWVVIFTGLFCISLYLIIIAYARKKGLVGS 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01539 372 Coils Coil 182 209 - -
Trre1g01539 372 FunFam Magnesium transporter MRS2-1 7 91 - -
Trre1g01539 372 Gene3D Magnesium transport protein CorA, transmembrane region 91 302 - -
Trre1g01539 372 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 17 370 IPR039204 -
Trre1g01539 372 CDD Mrs2_Mfm1p-like 20 369 IPR039204 -
Trre1g01539 372 Gene3D - 5 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01539 Trre-Chr1 11648520 11655059 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01539 7 345 MRS2 Gene Family AT5G64560 58.427 8.45e-125 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01539 K16075 - ming:122089203 440.654