Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01538 ATGTCAGAAAGTACAAAGTCAATAGTGAGGAAGACAAGCATATCGCCAAGGAGTACTTGGATTAAGCTTGATGCTAATGGACATAGTTCTTTCCTCGATGTAGACAAGTATGAAATCATGCGTCAAGTTCATATTGACGCTCGTGATCTTAGAATTCTTGATCCCCCTCTCTCTTATCCTTCAACCATTCTAGGCAGAGAAGAGGTTATCGTTCTTAACCTAGAGCATATCAAGGCAATCATCACTGCTAAAGAGGTCTTTTTGCTAGACCCAACTAGTAAAGATGTAATGCCTGTGGTTAGGGAACTACAAAGCAGATTTTCTAACATTGACACAAATCAAGGAGATGATGTTCAAGACAATAGTCCACTTGAGATTGAAGTAGATGAAGATGATGAGACACCTTTCGAATTTCGAGCACTAGAGATATTTCTTGAAGCAATTTGTAGCTTCCTTGATGCACGAGCTGCAGATCTTGAGATGGATACTTATCCTACATTAGATGAACTTACCAACAAGGTCAGTAGTCGTAATTTGGAAAAAATTCGTAAATTGAAGATTGCAATGACAAGGTTGACTGCTAGAGTTCAAAAGGTAAAAGAATCGATTGAACACTTAATGGATGATGATGAAAACATGGCTGATCTATACTTATCAAGAAAATTGGAAGGAGGAGCATCATCACCTATAAATCAATCAACTGCTGCAAATAATTGGATTGTTTCATCTCCAGGCACCAAAACATTTCTAAGAGATGAAAATGATGTGGATGAACTTGAAATGTTACTTGAGGCTTATTTCATGCAAATTGATGGCACTACTTCTAGATTGTCTATTCTGCGAGGATATATTGATGATACAGAGGACTACATTAATATTCAGATCGACAACCATCGAAATCAGTTAATTCAGTTAGAGCTATTTCTTAATGCAGCTGAACTTTGCCTAGCATGTTATTCAGTGGTGACTGGAATATTTGGCATGAATATACAATCTGGTTGGGAACACAATTATGATTACATGTTCAAATGGGTGGTTATTTTTACAGGACTCTCTTGCATTTCACTGTATCTCATCATAATTGCTTATGCTCGCAAAAAGGGATTGGTTGGATCATGA 1119 0.3718 MSESTKSIVRKTSISPRSTWIKLDANGHSSFLDVDKYEIMRQVHIDARDLRILDPPLSYPSTILGREEVIVLNLEHIKAIITAKEVFLLDPTSKDVMPVVRELQSRFSNIDTNQGDDVQDNSPLEIEVDEDDETPFEFRALEIFLEAICSFLDARAADLEMDTYPTLDELTNKVSSRNLEKIRKLKIAMTRLTARVQKVKESIEHLMDDDENMADLYLSRKLEGGASSPINQSTAANNWIVSSPGTKTFLRDENDVDELEMLLEAYFMQIDGTTSRLSILRGYIDDTEDYINIQIDNHRNQLIQLELFLNAAELCLACYSVVTGIFGMNIQSGWEHNYDYMFKWVVIFTGLSCISLYLIIIAYARKKGLVGS 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01538 372 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 17 370 IPR039204 -
Trre1g01538 372 Gene3D Magnesium transport protein CorA, transmembrane region 92 302 - -
Trre1g01538 372 Gene3D Magnesium transport protein CorA, transmembrane region 311 368 - -
Trre1g01538 372 FunFam Magnesium transporter MRS2-1 7 91 - -
Trre1g01538 372 FunFam Magnesium transporter MRS2-5 108 302 - -
Trre1g01538 372 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 309 360 IPR045863 -
Trre1g01538 372 Coils Coil 182 209 - -
Trre1g01538 372 Gene3D - 5 91 - -
Trre1g01538 372 CDD Mrs2_Mfm1p-like 20 369 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01538 Trre-Chr1 11637931 11646470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01538 7 345 MRS2 Gene Family AT5G64560 58.708 6.85e-127 368