Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01533 ATGGCCTCTCTGTTATTCACAGTACAGAGGCATGCTCCTGAGTTTGTAAAGCCATTAAAACCAACACCTCATGAAATAAAACTACTTTCAGACATAGATGACCAAGATGGATTACGTTTTCAAATTCCTGTTATACAATTTTACAAATATGATCCAAAAATGGCAGGGAAAGACCCTGTTGATGTTATTAGAAAAGCACTTGCAAAAACACTTGTGTTTTATTATCCATTTGCAGGTAGATTGAGGGAAGGTCCTGGTAGGAAACTTATGGTTGATTGTAATGATGAAGGTGTTTTGTTCATTGAAGCTGATGCTGATGTTAGACTTGAACAATTTGGTGATGCTCTTCAACCTCCTTTTCCTTGTTTGAATGAACTTCTTTTTGATGTTCCTGGTTCTTCAGAAGTGCTTAATACTCCATTGCTGCTTATTCAGGTAACACGTCTCAAATGTGGTGGTTTTATATTCGCCCTCCGTTTAAACCATACAATGAGTGACGCAGCGGGTTTGACACGATTTATGAGTGCTTTGGGCGAAATATCTTGTGGTTTGAAAGAGCCTTCAATTGCACCAGTGTGGCATAGAGAGCTACTAAATGCAAGAGACCCACCAAGAGTAACATGTACTCATCGCGAATACGAACAAATAGCTGACACCAAAGGAACCATTATCCCCTTAGACGATATGGCCCACCGTTCTTTCTTTTTTGGTCCCACTGAGGTAGCATCTATTCGCGCTCTCCTTCCACCTCATCAACAAAAACAATCCAATTTTGAAATTCTCACGGCATGCCTTTGGCGTTGTCGTACAATAGCATTACAACCAGACAATGACGAAGAAGTTCGTATTATCTGCATCGTTAACGCACGAGAAAAATTTAATCCACCTTTACCTAATGGTTACTACGGTAATACTTTCGCATTTCCTGTGGCAGTTACAACCGCAGGAAAACTAATTGAAAATCCATTAGGGTATGCATTGGAGTTAGTTAAAAAAGCAAAAGCTGACGTCACCGAAGAATATATGCATTCAGTTGCGGATCTTATGGTTATCAAGAATCGTCCTCATTTTACCGTGGTGAGATCGTTTCTAGTGTCTGATGTGACACGTGCTGCATTTGGAGAGGTTGATTTTGGTTGGGGGAAAGCTTTTTATGGAGGACCAGCTAAAGGAGGAGTTGGTGCTATTCCTGGTGTTGCTAGCTTTTATATACCTTTCAAAAATGCTAAAGGAGAAACAGGTTTGGTTATACCAGTTTGCTTACCAAATCAAGCTATGGAGAGGTTTGTAAAAGAGTTAGATAATGTGCTTAAGAACAACATTAACCAACCTACTATGATAGGTGGTCAAAAATCTAGTTTCATTATTTCTTCGTTGTAA 1380 0.3949 MASLLFTVQRHAPEFVKPLKPTPHEIKLLSDIDDQDGLRFQIPVIQFYKYDPKMAGKDPVDVIRKALAKTLVFYYPFAGRLREGPGRKLMVDCNDEGVLFIEADADVRLEQFGDALQPPFPCLNELLFDVPGSSEVLNTPLLLIQVTRLKCGGFIFALRLNHTMSDAAGLTRFMSALGEISCGLKEPSIAPVWHRELLNARDPPRVTCTHREYEQIADTKGTIIPLDDMAHRSFFFGPTEVASIRALLPPHQQKQSNFEILTACLWRCRTIALQPDNDEEVRIICIVNAREKFNPPLPNGYYGNTFAFPVAVTTAGKLIENPLGYALELVKKAKADVTEEYMHSVADLMVIKNRPHFTVVRSFLVSDVTRAAFGEVDFGWGKAFYGGPAKGGVGAIPGVASFYIPFKNAKGETGLVIPVCLPNQAMERFVKELDNVLKNNINQPTMIGGQKSSFIISSL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01533 459 Gene3D - 214 433 IPR023213 -
Trre1g01533 459 Pfam Transferase family 11 433 - -
Trre1g01533 459 Gene3D - 7 213 IPR023213 -
Trre1g01533 459 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 15 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01533 Trre-Chr1 11594086 11596855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01533 39 433 Monolignol Biosynthesis Gene Families AT5G48930 29.126 1.22e-45 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01533 K19861 - gmx:100797017 763.451