Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01503 ATGTTTTTGAACGATAATAACAATACTAACGGTTACAACCACCATCAACCACCACCATCACCGCCGCCGGGAATGTTACAAACTCATAGCCGCCGTGACCGTGCTCGCCATGGCACTCGCCGTTCACGTGCTTCCACTTCCACTTCTAATTCCATTGTTAGGGTTTCCGATACCGAACAACAACCACCACAACAACCAGAACAACAACAACCTAATCGATCTCCTTGCACCGATTATGATATGGCGTATTTTCATTCCTATGCTCACCTCGGTATTCACCAAGAAATGATCAAGGATCGTGTGCGGACTGACACTTATAGGGAAGCAATCATGCGGCATCAGAATTTTATTGCTGGCAAAGTCGTAGTTGATGTTGGATGCGGTACAGGAATCCTTTCCATATTTTGTGCTCAGGCCGGTGCAAAGCGGGTGTATGCAGTTGATGCCAGTGACATTGCTCTGCAGGCAAATGAAGTTGTTAAAGCAAATAACCTTTCTGATGTTGTCATTGTATTGCATGGACGAGTTGAGGATGTTGAAATTGATGAAGAGGTGGACGTTATAATTTCAGAATGGATGGGCTATATGCTACTATATGAGAGCATGCTTGGGAGTGTTATTACTGCCAGAGATCGCTGGCTCAAACCTGGTGGTCTAATTTTTCCTTCAAGTGCAACGTTGTACATGGCTCCTGTCACACATACTGACAGATACAGTGACAGCGTCGACTTTTGGCGCAATGTGTATGGAATTGATATGTCTGCCATGTTATCATTAGCAAAACAGTGTGCATTTGAGGAACCTTCTGTTGAGACGATAACTGGTGAAAATGTTCTGACATGGCCACATGTGGTAAAATATATTGATAGCTATACTGTTACCATCAGCGAGTTAGAAACTGTAACATCGAAGTTTAAGTTCAACTCAATGATGCGAGCTCCACTGCATGGTTTTGCATTTTGGTTTGATGTTGAGTTTAATGTGCCTACGATACCACCCACATCAGTTATCGAAAGTCATCAGGTGAATGGTAGTTTGAGAAAAAAGCGAACAAATCCAAGTGAAGCATTGGTACTGTCCACTGCACCCGAGGACCCTCCAACACATTGGCAGCAGACATTGGTATACTTTTATGATCCTATTGAGCTGGAACAAGATCAAGTTATTGAAGGTTTAGTGACATTGACACAAAGCAAAGAAAATGCCCGGTTTATGAATATTCACCTGGAATACACTTCAGGTAATCGATCATATGTGAAAGAGTCTGTTATGAGATGA 1278 0.428 MFLNDNNNTNGYNHHQPPPSPPPGMLQTHSRRDRARHGTRRSRASTSTSNSIVRVSDTEQQPPQQPEQQQPNRSPCTDYDMAYFHSYAHLGIHQEMIKDRVRTDTYREAIMRHQNFIAGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASDIALQANEVVKANNLSDVVIVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKPGGLIFPSSATLYMAPVTHTDRYSDSVDFWRNVYGIDMSAMLSLAKQCAFEEPSVETITGENVLTWPHVVKYIDSYTVTISELETVTSKFKFNSMMRAPLHGFAFWFDVEFNVPTIPPTSVIESHQVNGSLRKKRTNPSEALVLSTAPEDPPTHWQQTLVYFYDPIELEQDQVIEGLVTLTQSKENARFMNIHLEYTSGNRSYVKESVMR 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01503 425 MobiDBLite consensus disorder prediction 42 76 - -
Trre1g01503 425 FunFam Protein arginine N-methyltransferase 6 224 423 - -
Trre1g01503 425 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 86 415 IPR029063 -
Trre1g01503 425 FunFam Protein arginine N-methyltransferase 6 76 222 - -
Trre1g01503 425 CDD AdoMet_MTases 122 221 - -
Trre1g01503 425 MobiDBLite consensus disorder prediction 1 78 - -
Trre1g01503 425 Gene3D Vaccinia Virus protein VP39 77 222 IPR029063 -
Trre1g01503 425 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 80 408 IPR025799 GO:0016274|GO:0018216
Trre1g01503 425 Pfam Ribosomal protein L11 methyltransferase (PrmA) 118 192 - -
Trre1g01503 425 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 37 415 IPR025799 GO:0016274|GO:0018216
Trre1g01503 425 Gene3D - 224 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01503 Trre-Chr1 11386948 11395145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01503 83 391 C2H2 Transcription Factor Family AT3G12270 39.815 7.41e-66 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01503 K11437 - gmx:100809171 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g01503 1 11386948 11395145 Trre1g01503 1 11386948 11395145 ECH