Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01483 ATGGCTCAAATGTTTTCTTGCATGGTTTTAATAATTCTATCTATTTCATCATTGGCTTCAGCATCTCTTCAAGTTGGTTTCTATGGTTACACATGTCCATCTGCTGAGGAAATAGTGAGAAGTACAGTTAACAAAGCTATTTCACTCAATCCTGGCATAGGTGCTGGATTGATCAGAATGCATTTTCATGATTGCTTTGTGAGGGGTTGTGATGCTTCTGTGTTACTAGCATCAACACCGGGAAATATAGCCGAAAGAGACAACTTTATCAACAATCCAAGCTTACGAGGCTTCGATGTAATCACCGAGGCCAAGACTCGATTAGAATCTGCATGTCCACAAACAGTATCGTGTGCGGACATTCTTACCTTCGCAACACGAGACAGCATTGTCAAACTCAGTGGTGGCACTATAAACTACGACGTACCATCAGGACGAAGAGACGGACGTGTCTCAATCGCTGACGAAGTGCCAAAAAATATACCAGGACCTTCTTTCAACGCGGACCAACTTATCGCAAATTTCGCACAAAAAGGTTTGTCGGCTGATGAAATGGTTACACTCTCAGGAGCACATTCAATTGGTGTGTCACATTGTTCTTCATTTTCTAATCGTTTATATTCATTTAATGGTGCAAATTCTCAAGATCCTTCTATAGATCCTTCATATGTTGAACCATTGAAAACAAAGTGTCCACCACCACCAAGTAGCAATGATCCATTAGTAGTTCTTGATGTTACTACTCCTAATCGTTTGGATAATGTGTACTATGAAGGTTTGATTAATCATCATGGTTTGTTTACTTCAGATCAAACACTATTAAGTAGTCAATCTACACAAGAAAGTGTGCTAAGTAATGCAAATTATGGTTCAAATTGGGCTAACAAGTTTGCACAAGCAATGGTGCATATGGGTTCTATTGATGTGTTAAGTGGCTATGATGGTGAGATTAGGAAAGATTGCAGCTTTGTCAATTAG 978 0.3937 MAQMFSCMVLIILSISSLASASLQVGFYGYTCPSAEEIVRSTVNKAISLNPGIGAGLIRMHFHDCFVRGCDASVLLASTPGNIAERDNFINNPSLRGFDVITEAKTRLESACPQTVSCADILTFATRDSIVKLSGGTINYDVPSGRRDGRVSIADEVPKNIPGPSFNADQLIANFAQKGLSADEMVTLSGAHSIGVSHCSSFSNRLYSFNGANSQDPSIDPSYVEPLKTKCPPPPSSNDPLVVLDVTTPNRLDNVYYEGLINHHGLFTSDQTLLSSQSTQESVLSNANYGSNWANKFAQAMVHMGSIDVLSGYDGEIRKDCSFVN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01483 325 Gene3D - 26 325 - -
Trre1g01483 325 FunFam Peroxidase 162 304 - -
Trre1g01483 325 Pfam Peroxidase 39 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre1g01483 325 ProSiteProfiles Plant heme peroxidase family profile. 22 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre1g01483 325 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Trre1g01483 325 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g01483 325 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g01483 325 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g01483 325 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g01483 325 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g01483 325 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g01483 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g01483 325 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre1g01483 325 FunFam Peroxidase 26 170 - -
Trre1g01483 325 SUPERFAMILY Heme-dependent peroxidases 23 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre1g01483 325 CDD secretory_peroxidase 24 324 IPR033905 GO:0004601|GO:0042744
Trre1g01483 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Trre1g01483 325 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre1g01483 325 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre1g01483 325 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre1g01483 325 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre1g01483 325 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre1g01483 325 Gene3D Peroxidase, domain 2 162 304 - -
Trre1g01483 325 PANTHER PEROXIDASE 25-RELATED 12 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01483 Trre-Chr1 11247145 11248512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01483 8 325 Peroxidase AT4G11290 46.875 7.66e-94 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01483 K00430 - gmx:100786791 459.914