Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01477 ATGGTGTTGGTTAATTTCCATGAAATGTGGAAACCAGTTTTGGTTATGATTATAGTTAATTTAGCTTTAGCCTTTGTCAATGTATTTCTGAAGAAGGTTCTTAGTGAAGGAATGGATCATTTAACCATTTTAGCATATCGACAAGCAATTTCAGCCATTTTCTTGGCACCTATTGCTTGCTTCTTTGAAAGGGAAAGCAAGATTAATGGCCATATAATATGCCTACTTTTCTTTAGTGCTCTTGTAGGTGCAACACTCACTCAATACCTCTATCTTGTTGGACTTGAATATACATCAGCAACATTCTCATGTGCATTCCTCAATACAGTGCCTGTATTCACGTTCATTATGGCACTCCCAATGGGGATGGAGAAAGTGGACATTAAAAACAAGAGTGGAAAAGCCAAAATCTTGGGAACTTTTGTGTGTATTGGTGGAGCTTTGGTATTGATCCTTTATAAAGGAATGGCCATAATCAACCCACAATCTCATCAAGACAAAGCTACAACAATATCAGCAGCAGCACCCAACTTAAAGAAATGGATTATAGGTTCAATATTTCTGACTGCAGGTTGCCTCTTGTGGTCTTCATGGTTTCTTATACAAGAAAGGGTTGGAAAAAAGTATCCATATCAATACTCTAGCACAGCCATTTTGTCACTCTTTGCTACCATTCAATCAGCAATATTAAATTTGATTGTCCATAGAAACAATGCCAAATGGATTCTCAAAGGAAAGCTACAAATATTGACTGTTGTATATTCTTTGGGTGCTGCTGCTGAGTTTAGAATATCACTTTTACAGATGTTTGTGGCCGTTCTTGATCTCTGGATATTAAAAGAGGAAATTTATCTAGGAAGTGTTGTAGGATCAGTCTTGGTTATTTCTGGCATGTATATGCTCCTATGGGGTAAAAGTAAAGATAGAGGACAGTGTGCCTTGAAGGACACTCAAGAAAATCAAAAAGATGAAGAATGCCACTAA 984 0.3699 MVLVNFHEMWKPVLVMIIVNLALAFVNVFLKKVLSEGMDHLTILAYRQAISAIFLAPIACFFERESKINGHIICLLFFSALVGATLTQYLYLVGLEYTSATFSCAFLNTVPVFTFIMALPMGMEKVDIKNKSGKAKILGTFVCIGGALVLILYKGMAIINPQSHQDKATTISAAAPNLKKWIIGSIFLTAGCLLWSSWFLIQERVGKKYPYQYSSTAILSLFATIQSAILNLIVHRNNAKWILKGKLQILTVVYSLGAAAEFRISLLQMFVAVLDLWILKEEIYLGSVVGSVLVISGMYMLLWGKSKDRGQCALKDTQENQKDEECH 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01477 327 PANTHER WAT1-RELATED PROTEIN 11 317 IPR030184 GO:0016020|GO:0022857
Trre1g01477 327 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
Trre1g01477 327 Pfam EamA-like transporter family 11 151 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01477 Trre-Chr1 11201152 11204017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01477 8 273 Nodulin-like Gene Family AT3G30340 44.981 1.21e-82 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01477 - - gmx:100794199 458.373