Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01463 ATGGGTTGGCCTTACTTTGGAGAGACCCTCAAACTCTACACACAAAATCCAAATTCCTTCTTCTCCACAAGGCAGAAAAGGTATGGAGATATATTCAAGACACACATACTAGGTTGTCCTTGTGTGATGATATCAAGTCCTGAGGCAGCTAGAACAGTGCTAGTGACACAAGCAAATCTTTTCAAACCAACATACCCTCCAAGCAAAGAGAAAATGATAGGACCAGAAGCTTTGTTCTTTCAACAAGGTGCTTATCATTCCATGCTCAAGAAGCTAGTTCAAGCCTCCTTTTTACCTTCAACAATTAAAAATTCTGTCTCTCATGTGGACCAAATTGTACAAAAATTGATTCCAACTTGGGCTAATAGAACAATCAACACCTTGGAAGAAATGAAAAAGTATGCTTTTGAAGTGGCTGCAAATTCAGCCTTTGGAGTGATAAAGGAGTTGGAAATGGAAGAAATAAGAGATTTGTATAGTTGCTTGGTGAAGGGCTATAACTCTTATCCTTTGCATATTCCAGGAACATCTTATTGGAAGGCAATGAAGGCAAGGAAAGTTTTGAATGAGAGTATAAAGAGGATAATAGAAAGAAGAAAGGAGAGCAGGAATTATGGTGGTGGGTTGTTAGGAATTCTGTTGAGAGGCAGAGGTGATGAGAAGAAGAAGTACCAACTCACTGACTCTCAGGTTGCTGATAATCTCATTGGTGTCATCTTTGCTGCACATGACACAACAGCTAGTGTTCTAACATGGGTTGTTAAGTACTTGCATGACAATCCCAATCTCTTGGAAACTGTCACAAAAGAACATGAAGCAATAAAAGACAAACTTGTTAAGGAAAATCGTGGCCTTACATGGGAGGATACCAGGCAGATGCCCTTCACTAGCAGGGTAATCCAAGAGACATTAAGAAGTGCAAGCATACTATCATTCACATTTAGAGAAGCAGTAAGAGATGTGGTGTTAGAAGGTTACACCATTCCAAAAGGTTGGAAAGTCCTTCCACTTTTTAGAACCATTCACCATTCACCTAATTTCTTTCCTCATCCAGACAAATTTGATCCTTCAAGATTCGAGGTTCCACCTCGACCAAACACATATATGCCATTTGGAAATGGAGTCCACTCTTGTCCAGGTAGTGAGCTGGCTAAGCTTGAAGTTCTTGTCCTCCTTCACCATCTCACCCTTTCATACAGGTGGGAAGTTGTGGGATATGGAGATGGAATTCAATATGGTCCTTTTCCAGTGCCAAAACATGGATTACCAGTAAAGATAACTTTGAAGAAGAATTAG 1296 0.4012 MGWPYFGETLKLYTQNPNSFFSTRQKRYGDIFKTHILGCPCVMISSPEAARTVLVTQANLFKPTYPPSKEKMIGPEALFFQQGAYHSMLKKLVQASFLPSTIKNSVSHVDQIVQKLIPTWANRTINTLEEMKKYAFEVAANSAFGVIKELEMEEIRDLYSCLVKGYNSYPLHIPGTSYWKAMKARKVLNESIKRIIERRKESRNYGGGLLGILLRGRGDEKKKYQLTDSQVADNLIGVIFAAHDTTASVLTWVVKYLHDNPNLLETVTKEHEAIKDKLVKENRGLTWEDTRQMPFTSRVIQETLRSASILSFTFREAVRDVVLEGYTIPKGWKVLPLFRTIHHSPNFFPHPDKFDPSRFEVPPRPNTYMPFGNGVHSCPGSELAKLEVLVLLHHLTLSYRWEVVGYGDGIQYGPFPVPKHGLPVKITLKKN 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01463 431 Gene3D Cytochrome P450 1 429 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01463 431 Pfam Cytochrome P450 3 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01463 431 PANTHER CYTOCHROME P450 26 1 418 - -
Trre1g01463 431 PRINTS E-class P450 group I signature 297 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01463 431 PRINTS E-class P450 group I signature 25 44 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01463 431 PRINTS E-class P450 group I signature 378 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01463 431 PRINTS E-class P450 group I signature 337 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01463 431 PRINTS E-class P450 group I signature 250 276 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01463 431 PRINTS E-class P450 group I signature 368 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01463 431 PRINTS E-class P450 group I signature 230 247 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01463 431 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01463 431 PRINTS P450 superfamily signature 241 258 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01463 431 PRINTS P450 superfamily signature 298 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01463 431 PRINTS P450 superfamily signature 369 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01463 431 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 371 380 IPR017972 GO:0005506|GO:0016705
Trre1g01463 431 SUPERFAMILY Cytochrome P450 2 427 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01463 431 CDD CYP90-like 24 427 - -
Trre1g01463 431 FunFam Abscisic acid 8 1 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01463 Trre-Chr1 11113319 11121109 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01463 1 424 Cytochrome P450 AT3G19270 57.412 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01463 K09843 - gmx:100782541 726.472