Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01462 ATGCAACTTTTCATATTACTTACTAATTCTTGTTTAGATTTTTCTCTCCCTTTCAATATATTAATGCTCCTCTTTCTTTTTTGTTTTTTTATTCTACTTCCTTTCCTTCAATGGTGGAAACACCATAGAATCAAAGAGAAATGTTTACCCCCCGGTTCAATGGGTTGGCCTTACTTTGGAGAGACCCTCAAACTCTACACACAAAATCCAAATTCCTTCTTCTCCACAAGGCAGAAAAGGTATGGAGATATATTCAAGACACACATACTAGGTTGTCCTTGTGTGATGATATCAAGTCCTGAGGCAGCTAGAACAGTGCTAGTGACACAAGCAAATCTTTTCAAACCAACATACCCTCCAAGCAAAGAGAAAATGATAGGACCAGAAGCTTTGTTCTTTCAACAAGGTGCTTATCATTCCATGCTCAAGAAGCTAGTTCAAGCCTCCTTTTTACCTTCAACAATTAAAAATTCTGTCTCTCATGTGGACCAAATTGTACAAAAATTGATTCCAACTTGGGCTAATAGAACAATCAACACCTTGGAAGAAATGAAAAAGTATGCTTTTGAAGTGGCTGCAAATTCAGCCTTTGGAGTGATAAAGGAGTTGGAAATGGAAGAAATAAGAGATTTGTATAGTTGCTTGGTGAAGGGCTATAACTCTTATCCTTTGCATATTCCAGGAACATCTTATTGGAAGGCAATGAAGGCAAGGAAAGTTTTGAATGAGAGTATAAAGAGGATAATAGAAAGAAGAAAGGAGAGCAGGAATTATGGTGGTGGGTTGTTAGGAATTCTGTTGAGAGGCAGAGGTGATGAGAAGAAGAAGTACCAACTCACTGACTCTCAGGTTGCTGATAATCTCATTGGTGTCATCTTTGCTGCACATGACACAACAGCTAGTGTTCTAACATGGGTTGTTAAGTACTTGCATGACAATCCCAATCTCTTGGAAACTGTCACAAAAGAACATGAAGCAATAAAAGACAAACTTGTTAAGGAAAATCGTGGCCTTACATGGGAGGATACCAGGCAGATGCCCTTCACTAGCAGGGTAATCCAAGAGACATTAAGAAGTGCAAGCATACTATCATTCACATTTAGAGAAGCAGTAAGAGATGTGGTGTTAGAAGGTTACACCATTCCAAAAGGTTGGAAAGTCCTTCCACTTTTTAGAACCATTCACCATTCACCTAATTTCTTTCCTCATCCAGACAAATTTGATCCTTCAAGATTCGAGGTTCCACCTCGACCAAACACATATATGCCATTTGGAAATGGAGTCCACTCTTGTCCAGGTAGTGAGCTGGCTAAGCTTGAAGTTCTTGTCCTCCTTCACCATCTCACCCTTTCATACAGGTGGGAAGTTGTGGGATATGGAGATGGAATTCAATATGGTCCTTTTCCAGTGCCAAAACATGGATTACCAGTAAAGATAACTTTGAAGAAGAATTAG 1455 0.3918 MQLFILLTNSCLDFSLPFNILMLLFLFCFFILLPFLQWWKHHRIKEKCLPPGSMGWPYFGETLKLYTQNPNSFFSTRQKRYGDIFKTHILGCPCVMISSPEAARTVLVTQANLFKPTYPPSKEKMIGPEALFFQQGAYHSMLKKLVQASFLPSTIKNSVSHVDQIVQKLIPTWANRTINTLEEMKKYAFEVAANSAFGVIKELEMEEIRDLYSCLVKGYNSYPLHIPGTSYWKAMKARKVLNESIKRIIERRKESRNYGGGLLGILLRGRGDEKKKYQLTDSQVADNLIGVIFAAHDTTASVLTWVVKYLHDNPNLLETVTKEHEAIKDKLVKENRGLTWEDTRQMPFTSRVIQETLRSASILSFTFREAVRDVVLEGYTIPKGWKVLPLFRTIHHSPNFFPHPDKFDPSRFEVPPRPNTYMPFGNGVHSCPGSELAKLEVLVLLHHLTLSYRWEVVGYGDGIQYGPFPVPKHGLPVKITLKKN 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01462 484 Pfam Cytochrome P450 50 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01462 484 FunFam Abscisic acid 8 39 481 - -
Trre1g01462 484 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 424 433 IPR017972 GO:0005506|GO:0016705
Trre1g01462 484 CDD CYP90-like 77 480 - -
Trre1g01462 484 Gene3D Cytochrome P450 40 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01462 484 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01462 484 PRINTS P450 superfamily signature 431 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01462 484 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01462 484 PRINTS P450 superfamily signature 422 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01462 484 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01462 484 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01462 484 PRINTS E-class P450 group I signature 421 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01462 484 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01462 484 PRINTS E-class P450 group I signature 431 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01462 484 PRINTS E-class P450 group I signature 78 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01462 484 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g01462 484 PANTHER CYTOCHROME P450 26 45 471 - -
Trre1g01462 484 SUPERFAMILY Cytochrome P450 43 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01462 Trre-Chr1 11113160 11121109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01462 49 477 Cytochrome P450 AT3G19270 57.907 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01462 K09843 - gmx:100782541 755.362